RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 PGAP3Q96FM1 320 aaPredicted RBP5.59□□□□□ -1.51
VPS50-202ENST00000305866 TMEM176AQ96HP8 235 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 FAM161BQ96MY7 647 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 QKIQ96PU8 341 aaKnown RBP eCLIP5.59□□□□□ -1.51
VPS50-202ENST00000305866 PKP2Q99959 881 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 OSBPL2Q9H1P3 480 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 CDT1Q9H211 546 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 PCDH18Q9HCL0 1135 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 XAB2Q9HCS7 855 aaKnown RBP5.59□□□□□ -1.51
VPS50-202ENST00000305866 TMEM216Q9P0N5 145 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 STK39Q9UEW8 545 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 FZD1Q9UP38 647 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 INPP5FQ9Y2H2 1132 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 THSD7BQ9C0I4 1608 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 HTTP42858 3142 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 CEP350Q5VT06 3117 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.59□□□□□ -1.51
VPS50-202ENST00000305866 TESPA1A2RU30 521 aaPredicted RBP5.59□□□□□ -1.51
VPS50-202ENST00000305866 MATN2O00339 956 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 BCAS2O75934 225 aaPredicted RBP5.59□□□□□ -1.51
VPS50-202ENST00000305866 THRAP10827 490 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 ARSAP15289 507 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 HCAR3P49019 387 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 THOP1P52888 689 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 GJA9P57773 515 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 SESN3P58005 492 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 DEUP1Q05D60 604 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 ARHGAP1Q07960 439 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 LRP8Q14114 963 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 DALRD3Q5D0E6 543 aaKnown RBP5.59□□□□□ -1.51
VPS50-202ENST00000305866 WDR78Q5VTH9 848 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 HHATQ5VTY9 493 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 KAZNQ674X7 775 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 LAIR2Q6ISS4 152 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 TAPT1Q6NXT6 567 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 DNAJC24Q6P3W2 148 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 KLHL35Q6PF15 583 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 GADL1Q6ZQY3 521 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 CAPN12Q6ZSI9 719 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 TRIM74Q86UV6 250 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 TRIM73Q86UV7 250 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 LCA5Q86VQ0 697 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 C10orf107Q8IVU9 208 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 CCDC33Q8N5R6 958 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 LRRN4Q8WUT4 740 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 MOCOSQ96EN8 888 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 GPATCH1Q9BRR8 931 aaKnown RBP5.59□□□□□ -1.51
VPS50-202ENST00000305866 SPATC1LQ9H0A9 340 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 KLC2Q9H0B6 622 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 ZNF408Q9H9D4 720 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 VPS37BQ9H9H4 285 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 ZNF358Q9NW07 568 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 BARX2Q9UMQ3 279 aaPredicted RBP5.59□□□□□ -1.51
VPS50-202ENST00000305866 PSMD13Q9UNM6 376 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 ZNF148Q9UQR1 794 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 VWA7Q9Y334 891 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 ARIH2O95376 493 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 ESRRAP11474 423 aaPredicted RBP5.59□□□□□ -1.52
VPS50-202ENST00000305866 KRT5P13647 590 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 XRCC1P18887 633 aaPredicted RBP5.59□□□□□ -1.52
VPS50-202ENST00000305866 KRT15P19012 456 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 CD97P48960 835 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 NDST2P52849 883 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 SCAPQ12770 1279 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 MGAT5BQ3V5L5 792 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 SEZ6Q53EL9 994 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 MDH1BQ5I0G3 518 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 RBM44Q6ZP01 1051 aaKnown RBP5.59□□□□□ -1.52
VPS50-202ENST00000305866 BHLHA9Q7RTU4 235 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 WDR75Q8IWA0 830 aaKnown RBP5.59□□□□□ -1.52
VPS50-202ENST00000305866 HACE1Q8IYU2 909 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 EMC1Q8N766 993 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 EFCAB3Q8N7B9 438 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 PPTC7Q8NI37 304 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 KCTD13Q8WZ19 329 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 ATP2A3Q93084 1043 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 TTC17Q96AE7 1141 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 THTPAQ9BU02 230 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 MROH8Q9H579 483 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 FAIMQ9NVQ4 179 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 GALNT8Q9NY28 637 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 PAK5Q9P286 719 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 COPG2Q9UBF2 871 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 ANGPTL2Q9UKU9 493 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 AGTPBP1Q9UPW5 1226 aa5.59□□□□□ -1.52
VPS50-202ENST00000305866 MBLAC1A4D2B0 266 aaPredicted RBP5.58□□□□□ -1.52
VPS50-202ENST00000305866 H3BNH8 94 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 H3BSA7 217 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 SLC22A2O15244 555 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 MICAL2O94851 1124 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 PRKCBP05771 671 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 SNRPAP09012 282 aaKnown RBP5.58□□□□□ -1.52
VPS50-202ENST00000305866 TROVE2P10155 538 aaKnown RBP eCLIP5.58□□□□□ -1.52
VPS50-202ENST00000305866 MYCLP12524 364 aaPredicted RBP5.58□□□□□ -1.52
VPS50-202ENST00000305866 MYL4P12829 197 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 CCDC130P13994 396 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 RAG1P15918 1043 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 ZNF23P17027 643 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 ARNTP27540 789 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 RBL1P28749 1068 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms