RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 PPM1NQ8N819 430 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 SLC39A13Q96H72 371 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 APOPT1Q96IL0 206 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 SPATA17Q96L03 361 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 CEP295NLQ96MC4 621 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 PPP1R2P1Q96PQ5 205 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 ELAC2Q9BQ52 826 aaKnown RBP19.92■□□□□ 0.78
HOXC4-201ENST00000303406 UNC93B1Q9H1C4 597 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 KDM4CQ9H3R0 1056 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 ACTR5Q9H9F9 607 aaPredicted RBP19.92■□□□□ 0.78
HOXC4-201ENST00000303406 FGFR1OP2Q9NVK5 253 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 CLIC5Q9NZA1 410 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 OGDHLQ9ULD0 1010 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 USP15Q9Y4E8 981 aaPredicted RBP19.92■□□□□ 0.78
HOXC4-201ENST00000303406 SNX10Q9Y5X0 201 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 NR2E3Q9Y5X4 410 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 CCNFP41002 786 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 GRIA1P42261 906 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 SLC11A1P49279 550 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 NEK3P51956 506 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 DNAJC3Q13217 504 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 KCTD11Q693B1 232 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 FUT10Q6P4F1 479 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 TEKT5Q96M29 485 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 VPS11Q9H270 941 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 SMYD2Q9NRG4 433 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 OLA1Q9NTK5 396 aaKnown RBP19.92■□□□□ 0.78
HOXC4-201ENST00000303406 TRIM17Q9Y577 477 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 KCNK1O00180 336 aa19.91■□□□□ 0.78
HOXC4-201ENST00000303406 MTA1Q13330 715 aa19.91■□□□□ 0.78
HOXC4-201ENST00000303406 SLC1A5Q15758 541 aa19.91■□□□□ 0.78
HOXC4-201ENST00000303406 SPANXN3Q5MJ09 141 aa19.91■□□□□ 0.78
HOXC4-201ENST00000303406 ARTNQ5T4W7 220 aa19.91■□□□□ 0.78
HOXC4-201ENST00000303406 AFMIDQ63HM1 303 aa19.91■□□□□ 0.78
HOXC4-201ENST00000303406 LVRNQ6Q4G3 990 aa19.91■□□□□ 0.78
HOXC4-201ENST00000303406 TIFABQ6ZNK6 161 aa19.91■□□□□ 0.78
HOXC4-201ENST00000303406 CTAGE3PQ8IX95 158 aa19.91■□□□□ 0.78
HOXC4-201ENST00000303406 ZSCAN18Q8TBC5 510 aaPredicted RBP19.91■□□□□ 0.78
HOXC4-201ENST00000303406 ARNTL2Q8WYA1 636 aa19.91■□□□□ 0.78
HOXC4-201ENST00000303406 CDKL2Q92772 493 aa19.91■□□□□ 0.78
HOXC4-201ENST00000303406 GORASP1Q9BQQ3 440 aa19.91■□□□□ 0.78
HOXC4-201ENST00000303406 GPR62Q9BZJ7 368 aa19.91■□□□□ 0.78
HOXC4-201ENST00000303406 CASS4Q9NQ75 786 aa19.91■□□□□ 0.78
HOXC4-201ENST00000303406 DONSONQ9NYP3 566 aa19.91■□□□□ 0.78
HOXC4-201ENST00000303406 STARD13Q9Y3M8 1113 aa19.91■□□□□ 0.78
HOXC4-201ENST00000303406 TTC3P53804 2025 aa19.9■□□□□ 0.78
HOXC4-201ENST00000303406 CCT8L1PA6NM43 557 aa19.9■□□□□ 0.78
HOXC4-201ENST00000303406 CXorf49A8MYA2 514 aaPredicted RBP19.9■□□□□ 0.78
HOXC4-201ENST00000303406 GALTP07902 379 aa19.9■□□□□ 0.78
HOXC4-201ENST00000303406 DHRS4L1P0CG22 281 aa19.9■□□□□ 0.78
HOXC4-201ENST00000303406 MAGEA9P43362 315 aa19.9■□□□□ 0.78
HOXC4-201ENST00000303406 NIPAL4Q0D2K0 466 aa19.9■□□□□ 0.78
HOXC4-201ENST00000303406 PRPSAP1Q14558 356 aa19.9■□□□□ 0.78
HOXC4-201ENST00000303406 SEPT7Q16181 437 aaKnown RBP19.9■□□□□ 0.78
HOXC4-201ENST00000303406 FAM182AQ5T1J6 154 aa19.9■□□□□ 0.78
HOXC4-201ENST00000303406 ANKS3Q6ZW76 656 aa19.9■□□□□ 0.78
HOXC4-201ENST00000303406 SPATA21Q7Z572 469 aa19.9■□□□□ 0.78
HOXC4-201ENST00000303406 CHSY1Q86X52 802 aa19.9■□□□□ 0.78
HOXC4-201ENST00000303406 ARHGAP12Q8IWW6 846 aa19.9■□□□□ 0.78
HOXC4-201ENST00000303406 NETO2Q8NC67 525 aa19.9■□□□□ 0.78
HOXC4-201ENST00000303406 TCP10LQ8TDR4 215 aa19.9■□□□□ 0.78
HOXC4-201ENST00000303406 CCT6BQ92526 530 aa19.9■□□□□ 0.78
HOXC4-201ENST00000303406 OXNAD1Q96HP4 312 aaPredicted RBP19.9■□□□□ 0.78
HOXC4-201ENST00000303406 FCRL2Q96LA5 508 aaPredicted RBP19.9■□□□□ 0.78
HOXC4-201ENST00000303406 SFMBT1Q9UHJ3 866 aa19.9■□□□□ 0.78
HOXC4-201ENST00000303406 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.89■□□□□ 0.77
HOXC4-201ENST00000303406 WDR27A2RRH5 827 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 MTMR11A4FU01 709 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 TRIM49D1C9J1S8 452 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 ZBTB24O43167 697 aaPredicted RBP19.89■□□□□ 0.77
HOXC4-201ENST00000303406 LPXNO60711 386 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 FSBPO95073 299 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 MGAT1P26572 445 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 YWHAQP27348 245 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 CD68P34810 354 aaPredicted RBP19.89■□□□□ 0.77
HOXC4-201ENST00000303406 NPY2RP49146 381 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 PGFP49763 221 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 MLLT6P55198 1093 aaPredicted RBP19.89■□□□□ 0.77
HOXC4-201ENST00000303406 ZBTB17Q13105 803 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 DDR2Q16832 855 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 TIGD7Q6NT04 549 aaPredicted RBP19.89■□□□□ 0.77
HOXC4-201ENST00000303406 ANKRD33Q7Z3H0 272 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 LRRC43Q8N309 656 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 RTL3Q8N8U3 475 aaKnown RBP19.89■□□□□ 0.77
HOXC4-201ENST00000303406 LRRC8CQ8TDW0 803 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 SH3TC2Q8TF17 1288 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 FATE1Q969F0 183 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 SERAC1Q96JX3 654 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 CEP41Q9BYV8 373 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 LRRC40Q9H9A6 602 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 OSER1Q9NX31 292 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 PRKAG3Q9UGI9 489 aa19.89■□□□□ 0.77
HOXC4-201ENST00000303406 MAGEB16A2A368 324 aa19.88■□□□□ 0.77
HOXC4-201ENST00000303406 CSH1P0DML2 217 aa19.88■□□□□ 0.77
HOXC4-201ENST00000303406 CSH2P0DML3 217 aa19.88■□□□□ 0.77
HOXC4-201ENST00000303406 HAPLN1P10915 354 aaPredicted RBP19.88■□□□□ 0.77
HOXC4-201ENST00000303406 CRYMQ14894 314 aa19.88■□□□□ 0.77
HOXC4-201ENST00000303406 RNF187Q5TA31 235 aaPredicted RBP19.88■□□□□ 0.77
HOXC4-201ENST00000303406 RWDD4Q6NW29 188 aaKnown RBP19.88■□□□□ 0.77
HOXC4-201ENST00000303406 TRMT10BQ6PF06 316 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms