RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 TTC19Q6DKK2 380 aaPredicted RBP10.87□□□□□ -0.67
CLP1-201ENST00000302731 RWDD4Q6NW29 188 aaKnown RBP10.87□□□□□ -0.67
CLP1-201ENST00000302731 ARHGAP12Q8IWW6 846 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 TP53INP2Q8IXH6 220 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 CYP4X1Q8N118 509 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 AGGF1Q8N302 714 aaeCLIP10.87□□□□□ -0.67
CLP1-201ENST00000302731 CCDC33Q8N5R6 958 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 RTL3Q8N8U3 475 aaKnown RBP10.87□□□□□ -0.67
CLP1-201ENST00000302731 ZNF461Q8TAF7 563 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 BCAS4Q8TDM0 211 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 ATXN2LQ8WWM7 1075 aaKnown RBP10.87□□□□□ -0.67
CLP1-201ENST00000302731 FATE1Q969F0 183 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 TMEM169Q96HH4 297 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 PAWRQ96IZ0 340 aaKnown RBP10.87□□□□□ -0.67
CLP1-201ENST00000302731 PPP1R2P1Q96PQ5 205 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 PAFAH2Q99487 392 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 EBNA1BP2Q99848 306 aaKnown RBP10.87□□□□□ -0.67
CLP1-201ENST00000302731 VN1R3Q9BXE9 311 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 GBA3Q9H227 469 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 RETREG1Q9H6L5 497 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 SSU72Q9NP77 194 aaKnown RBP10.87□□□□□ -0.67
CLP1-201ENST00000302731 INTS9Q9NV88 658 aaKnown RBP10.87□□□□□ -0.67
CLP1-201ENST00000302731 MARCH2Q9P0N8 246 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 SEPT10Q9P0V9 454 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 TBK1Q9UHD2 729 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 IGLV3-10A0A075B6K4 115 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 TMEM120BA0PK00 339 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 GMNCA6NCL1 334 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 SDR42E2A6NKP2 422 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 KCNK1O00180 336 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 AP3B1O00203 1094 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 PSMD3O43242 534 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 CACNG3O60359 315 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 FAM155BO75949 473 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 AP2A1O95782 977 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 FAM107AO95990 144 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 RHOQP17081 205 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 DNAJB2P25686 324 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 PSMB4P28070 264 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 TUBP50607 506 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 EFEMP1Q12805 493 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 RASIP1Q5U651 963 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 PIK3R6Q5UE93 754 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 TIGD7Q6NT04 549 aaPredicted RBP10.87□□□□□ -0.67
CLP1-201ENST00000302731 KLHDC10Q6PID8 442 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 CAPN12Q6ZSI9 719 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 NECAB2Q7Z6G3 386 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 DDX53Q86TM3 631 aaKnown RBP10.87□□□□□ -0.67
CLP1-201ENST00000302731 ZNF683Q8IZ20 524 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 TMEM199Q8N511 208 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 PDCD7Q8N8D1 485 aaKnown RBP10.87□□□□□ -0.67
CLP1-201ENST00000302731 GSDMBQ8TAX9 411 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 ZSCAN18Q8TBC5 510 aaPredicted RBP10.87□□□□□ -0.67
CLP1-201ENST00000302731 MDM1Q8TC05 714 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 SLC44A1Q8WWI5 657 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 SGSM3Q96HU1 749 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 TEKT5Q96M29 485 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 CLSTN3Q9BQT9 956 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 PRDM5Q9NQX1 630 aaPredicted RBP10.87□□□□□ -0.67
CLP1-201ENST00000302731 ZNF180Q9UJW8 692 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 NUDT5Q9UKK9 219 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 SMG5Q9UPR3 1016 aaKnown RBP10.87□□□□□ -0.67
CLP1-201ENST00000302731 HBS1LQ9Y450 684 aaKnown RBP10.87□□□□□ -0.67
CLP1-201ENST00000302731 TRIM43BA6NCK2 446 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 ERICH4A6NGS2 130 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 PRPF4O43172 522 aaKnown RBP eCLIP10.86□□□□□ -0.67
CLP1-201ENST00000302731 ADAM12O43184 909 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 TLR5O60602 858 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 SOAT2O75908 522 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 C1QAP02745 245 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 CSH1P0DML2 217 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 CSH2P0DML3 217 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 RAG1P15918 1043 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 KRT15P19012 456 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 PPM1AP35813 382 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 NDST2P52849 883 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 WDR5P61964 334 aaKnown RBP10.86□□□□□ -0.67
CLP1-201ENST00000302731 BTG3Q14201 252 aaPredicted RBP10.86□□□□□ -0.67
CLP1-201ENST00000302731 MS4A13Q5J8X5 152 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 C10orf120Q5SQS8 335 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 SPOUT1Q5T280 376 aaKnown RBP10.86□□□□□ -0.67
CLP1-201ENST00000302731 STEAP4Q687X5 459 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 KCTD11Q693B1 232 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 ZNF449Q6P9G9 518 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 NLRP14Q86W24 1093 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 SRRM1Q8IYB3 904 aaKnown RBP10.86□□□□□ -0.67
CLP1-201ENST00000302731 UMODL1-AS1Q8N2C9 162 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 ATPAF2Q8N5M1 289 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 STKLD1Q8NE28 680 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 GPR152Q8TDT2 470 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 DCAKDQ8WVC6 231 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 TRIM43Q96BQ3 446 aaPredicted RBP10.86□□□□□ -0.67
CLP1-201ENST00000302731 ALKBH8Q96BT7 664 aaKnown RBP10.86□□□□□ -0.67
CLP1-201ENST00000302731 MYRFLQ96LU7 910 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 ZYG11BQ9C0D3 744 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 TMEM248Q9NWD8 314 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 SPG21Q9NZD8 308 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 RSPH14Q9UHP6 348 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 TTLL3Q9Y4R7 772 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 PCDHA11Q9Y5I1 949 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms