RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 DARSP14868 501 aaKnown RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 RRM1P23921 792 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 RAB27AP51159 221 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 NR1D2Q14995 579 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 PCBP1Q15365 356 aaKnown RBP eCLIP7.79□□□□□ -1.168e-7■■■□□ 18.7
SF3B3-201ENST00000302516 GJB7Q6PEY0 223 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 LRRC71Q8N4P6 559 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 COLGALT1Q8NBJ5 622 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 UCMAQ8WVF2 138 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 LBHD1Q9BQE6 289 aaPredicted RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 MTIF3Q9H2K0 278 aaKnown RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 A1CFQ9NQ94 594 aaKnown RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 CYLDQ9NQC7 956 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 FAM196BA6NMK8 535 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 RXRBP28702 533 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 PDK4Q16654 411 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 CDC42EP5Q6NZY7 148 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 ZNF549Q6P9A3 640 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 TRIM48Q8IWZ4 208 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 FAM126BQ8IXS8 530 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 C4orf19Q8IY42 314 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 UBASH3BQ8TF42 649 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 SPIRE2Q8WWL2 714 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 CENPIQ92674 756 aaPredicted RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 UBE2E3Q969T4 207 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 SERAC1Q96JX3 654 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 ATXN10Q9UBB4 475 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 C17orf102A2RUQ5 167 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 S100A9P06702 114 aaKnown RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 ALOX12P18054 663 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 FEN1P39748 380 aaKnown RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 ZNF284Q2VY69 593 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 ERAP2Q6P179 960 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 NEK5Q6P3R8 708 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 ZNF276Q8N554 614 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 UTP15Q8TED0 518 aaKnown RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 VPS51Q9UID3 782 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 WDR27A2RRH5 827 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 SUPT20HL2P0C7V6 817 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 ERVK-9P63128 1117 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 FCHO2Q0JRZ9 810 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 ZNF57Q68EA5 555 aaPredicted RBP7.78□□□□□ -1.16
SF3B3-201ENST00000302516 MYLPFQ96A32 169 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 TARS2Q9BW92 718 aaKnown RBP7.78□□□□□ -1.16
SF3B3-201ENST00000302516 ACTR8Q9H981 624 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 AKAP3O75969 853 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 STAU1O95793 577 aaKnown RBP7.78□□□□□ -1.16
SF3B3-201ENST00000302516 PCNAP12004 261 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 PDK3Q15120 406 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 INSCQ1MX18 579 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 OTUD5Q96G74 571 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 SMARCD1Q96GM5 515 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 KIFC1Q9BW19 673 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 NOL6Q9H6R4 1146 aaKnown RBP7.78□□□□□ -1.16
SF3B3-201ENST00000302516 AKAP7Q9P0M2 348 aaPredicted RBP7.78□□□□□ -1.16
SF3B3-201ENST00000302516 MCM8Q9UJA3 840 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 CDH9Q9ULB4 789 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 ING4Q9UNL4 249 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 ROBO3Q96MS0 1386 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 SALL1Q9NSC2 1324 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 TRIM43BA6NCK2 446 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 TGDSO95455 350 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 ERBB2P04626 1255 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 CYP1A2P05177 515 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 NOS3P29474 1203 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 CDC16Q13042 620 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 PIWIL2Q8TC59 973 aaKnown RBP7.78□□□□□ -1.16
SF3B3-201ENST00000302516 SGF29Q96ES7 293 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 KIAA1683Q9H0B3 1180 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 NINJ2Q9NZG7 142 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 C3orf18Q9UK00 162 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 UBR1Q8IWV7 1749 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 NCF1BA6NI72 391 aaPredicted RBP7.78□□□□□ -1.16
SF3B3-201ENST00000302516 NCF1CA8MVU1 366 aaPredicted RBP7.78□□□□□ -1.16
SF3B3-201ENST00000302516 MED24O75448 989 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 MFN2O95140 757 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 NCF1P14598 390 aaPredicted RBP7.78□□□□□ -1.16
SF3B3-201ENST00000302516 PCSK2P16519 638 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 RAP1GAPP47736 663 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 HNMTP50135 292 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 GLRA4Q5JXX5 417 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 PEG10Q86TG7 708 aaKnown RBP7.78□□□□□ -1.16
SF3B3-201ENST00000302516 KIAA0895Q8NCT3 520 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 GPRC5AQ8NFJ5 357 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 DGCR14Q96DF8 476 aaKnown RBP7.78□□□□□ -1.16
SF3B3-201ENST00000302516 RNPEPQ9H4A4 650 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 CLK4Q9HAZ1 481 aaKnown RBP7.78□□□□□ -1.16
SF3B3-201ENST00000302516 DDX18Q9NVP1 670 aaKnown RBP7.78□□□□□ -1.16
SF3B3-201ENST00000302516 EHD3Q9NZN3 535 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 BBIP1A8MTZ0 92 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 GPR182O15218 404 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 GUCY1B2O75343 617 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 CCR1P32246 355 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 TCF7P36402 384 aaPredicted RBP7.78□□□□□ -1.16
SF3B3-201ENST00000302516 RFX5P48382 616 aaPredicted RBP7.78□□□□□ -1.16
SF3B3-201ENST00000302516 CSE1LP55060 971 aaKnown RBP7.78□□□□□ -1.16
SF3B3-201ENST00000302516 DMPKQ09013 629 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 BORCS5Q969J3 196 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 PPP1R14BQ96C90 147 aa7.78□□□□□ -1.16
SF3B3-201ENST00000302516 RNF145Q96MT1 663 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms