RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 VANGL2Q9ULK5 521 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 PCDHA3Q9Y5H8 950 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 DUSP10Q9Y6W6 482 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 ZNF638Q14966 1978 aaKnown RBP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 DOCK8Q8NF50 2099 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 NUP210Q8TEM1 1887 aaPredicted RBP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 GOLGA6L7A0A1B0GV03 622 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 MACROD2A1Z1Q3 448 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 TBC1D3BA6NDS4 549 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 ZSCAN5CA6NGD5 496 aaPredicted RBP9.1□□□□□ -0.95
VPREB1-201ENST00000302273 EEF2KO00418 725 aaKnown RBP9.1□□□□□ -0.95
VPREB1-201ENST00000302273 DAPK3O43293 454 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 TBL1XO60907 577 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 SRGAP2O75044 1071 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 KAT7O95251 611 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 HNRNPLP14866 589 aaKnown RBP eCLIP9.1□□□□□ -0.95
VPREB1-201ENST00000302273 COL9A1P20849 921 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 CTNNA2P26232 953 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 IL1R2P27930 398 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 OR1E1P30953 314 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 SERPINB6P35237 376 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 OPRD1P41143 372 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 SSR1P43307 286 aaKnown RBP9.1□□□□□ -0.95
VPREB1-201ENST00000302273 NR2C2P49116 596 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 RWDD2BP57060 319 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 TPI1P60174 286 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 RPS24P62847 133 aaKnown RBP9.1□□□□□ -0.95
VPREB1-201ENST00000302273 ZNF33AQ06730 810 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 CCINQ13939 588 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 TAZQ16635 292 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 PARP15Q460N3 678 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 RFWD3Q6PCD5 774 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 TPRG1Q6ZUI0 275 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 PEX26Q7Z412 305 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 ANKS1BQ7Z6G8 1248 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 NT5DC3Q86UY8 548 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 NLRP14Q86W24 1093 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 SIX5Q8N196 739 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 PHTF2Q8N3S3 785 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 TERB1Q8NA31 727 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 CASKIN2Q8WXE0 1202 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 TSC1Q92574 1164 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 IGSF8Q969P0 613 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 TTC17Q96AE7 1141 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 FAF2Q96CS3 445 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 HES6Q96HZ4 224 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 RBM41Q96IZ5 413 aaKnown RBP9.1□□□□□ -0.95
VPREB1-201ENST00000302273 PRICKLE1Q96MT3 831 aaPredicted RBP9.1□□□□□ -0.95
VPREB1-201ENST00000302273 PEBP4Q96S96 227 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 C2orf49Q9BVC5 232 aaPredicted RBP9.1□□□□□ -0.95
VPREB1-201ENST00000302273 DHX35Q9H5Z1 703 aaKnown RBP9.1□□□□□ -0.95
VPREB1-201ENST00000302273 EPHX3Q9H6B9 360 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 LTB4R2Q9NPC1 389 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 ARHGEF4Q9NR80 690 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.1□□□□□ -0.95
VPREB1-201ENST00000302273 DNAJC17Q9NVM6 304 aaKnown RBP9.1□□□□□ -0.95
VPREB1-201ENST00000302273 ZNF212Q9UDV6 495 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 SALL4Q9UJQ4 1053 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 GUCA1BQ9UMX6 200 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 PLA2G4CQ9UP65 541 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 SIT1Q9Y3P8 196 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 JRKLQ9Y4A0 524 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 MYH10P35580 1976 aa9.1□□□□□ -0.95
VPREB1-201ENST00000302273 DENND4CQ5VZ89 1909 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 ANAPC1Q9H1A4 1944 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 GRID2IPA4D2P6 1211 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 KRBA1A5PL33 1030 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 SHISA7A6NL88 538 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 CHURC1-FNTBB4DL54 471 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 RIOK3O14730 519 aaKnown RBP9.09□□□□□ -0.95
VPREB1-201ENST00000302273 BUB1O43683 1085 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 CREB3O43889 395 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 KIF5CO60282 957 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 GPR37L1O60883 481 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 PALMO75781 387 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 SRPRAP08240 638 aaKnown RBP9.09□□□□□ -0.95
VPREB1-201ENST00000302273 C7P10643 843 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 CHRNB1P11230 501 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 PABPC1P11940 636 aaKnown RBP9.09□□□□□ -0.95
VPREB1-201ENST00000302273 MX2P20592 715 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 KDELR1P24390 212 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 IL4RP24394 825 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 HLA-FP30511 346 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 PTPN7P35236 360 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 NNMTP40261 264 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 CLCN6P51797 869 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 CDH6P55285 790 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 ENPP2Q13822 863 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 DPYSQ14117 519 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 TFDP2Q14188 446 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 KRT81Q14533 505 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 PPP2R5EQ16537 467 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 TFDP3Q5H9I0 405 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 KCNT1Q5JUK3 1230 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 ARTNQ5T4W7 220 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 RETSATQ6NUM9 610 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 RWDD4Q6NW29 188 aaKnown RBP9.09□□□□□ -0.95
VPREB1-201ENST00000302273 TMCO3Q6UWJ1 677 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 ZNF687Q8N1G0 1237 aa9.09□□□□□ -0.95
VPREB1-201ENST00000302273 FATE1Q969F0 183 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms