RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 GIPC1O14908 333 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 B4GALT5O43286 388 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 KCNA2P16389 499 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 HDCP19113 662 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 NAGLUP54802 743 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 COLGALT1Q8NBJ5 622 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 CATSPER1Q8NEC5 780 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 THAP11Q96EK4 314 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 EBF1Q9UH73 591 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 SLC39A10Q9ULF5 831 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 SH3GLB1Q9Y371 365 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 RGSL1A5PLK6 1076 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 TMEM233B4DJY2 109 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 TK2O00142 265 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 PHGDHO43175 533 aaKnown RBP15□□□□□ -0.01
COL6A2-201ENST00000300527 ATP5BP06576 529 aaKnown RBP15□□□□□ -0.01
COL6A2-201ENST00000300527 ASNSP08243 561 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 GARSP41250 739 aaKnown RBP15□□□□□ -0.01
COL6A2-201ENST00000300527 POTEHQ6S545 545 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 GK5Q6ZS86 529 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 FASTKD5Q7L8L6 764 aaKnown RBP15□□□□□ -0.01
COL6A2-201ENST00000300527 VSIG10LQ86VR7 867 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 FAM47BQ8NA70 645 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 GATA5Q9BWX5 397 aaPredicted RBP15□□□□□ -0.01
COL6A2-201ENST00000300527 ILKAPQ9H0C8 392 aaPredicted RBP15□□□□□ -0.01
COL6A2-201ENST00000300527 RNF19AQ9NV58 838 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 GMEB1Q9Y692 573 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 C7orf72A4D263 438 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 PLOD2O00469 737 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 OATP04181 439 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 PRKCBP05771 671 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 DPP6P42658 865 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 NDST2P52849 883 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 PITRM1Q5JRX3 1037 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 FAM219BQ5XKK7 198 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 SEL1L3Q68CR1 1132 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 NUP93Q8N1F7 819 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 RMND5BQ96G75 393 aaPredicted RBP14.99□□□□□ -0.01
COL6A2-201ENST00000300527 IL1RL2Q9HB29 575 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 CIDEBQ9UHD4 219 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.99□□□□□ -0.01
COL6A2-201ENST00000300527 ZNF195O14628 629 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 PEX10O60683 326 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 VAPBO95292 243 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 JUNP05412 331 aaKnown RBP14.99□□□□□ -0.01
COL6A2-201ENST00000300527 IL4RP24394 825 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 MAGEA8P43361 318 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 GRAMD4Q6IC98 578 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 PYROXD2Q8N2H3 581 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 SLC4A11Q8NBS3 891 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 ADCY4Q8NFM4 1077 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 FAM151AQ8WW52 585 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 MRPL4Q9BYD3 311 aaKnown RBP14.99□□□□□ -0.01
COL6A2-201ENST00000300527 FAM96AQ9H5X1 160 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 DHX33Q9H6R0 707 aaKnown RBP14.99□□□□□ -0.01
COL6A2-201ENST00000300527 ZNF696Q9H7X3 374 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 NOL11Q9H8H0 719 aaKnown RBP14.99□□□□□ -0.01
COL6A2-201ENST00000300527 SLC38A10Q9HBR0 1119 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 BCAP29Q9UHQ4 241 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 FOCADQ5VW36 1801 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 EP400Q96L91 3159 aa14.99□□□□□ -0.01
COL6A2-201ENST00000300527 PAPSS1O43252 624 aaPredicted RBP14.98□□□□□ -0.01
COL6A2-201ENST00000300527 RGS20O76081 388 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 NFICP08651 508 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 SUPT20HL2P0C7V6 817 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 PDAP1Q13442 181 aaKnown RBP14.98□□□□□ -0.01
COL6A2-201ENST00000300527 TAZQ16635 292 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 SUPT20HL1Q3ZLR7 823 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 EEF1DP3Q658K8 133 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 LRRC8EQ6NSJ5 796 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 EPGNQ6UW88 154 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 FNIP1Q8TF40 1166 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 FRMD8Q9BZ67 464 aaPredicted RBP14.98□□□□□ -0.01
COL6A2-201ENST00000300527 PDLIM7Q9NR12 457 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 GTSE1Q9NYZ3 720 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 AURKCQ9UQB9 309 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 RNF11Q9Y3C5 154 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 KCNK1O00180 336 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 AKAP10O43572 662 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 PSMB4P28070 264 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 ESRRGP62508 458 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 SP2Q02086 613 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 MPP3Q13368 585 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 ZNF423Q2M1K9 1284 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 MGAT5BQ3V5L5 792 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 CCDC14Q49A88 953 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 XKR5Q6UX68 686 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 FNDC8Q8TC99 324 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 KBTBD7Q8WVZ9 684 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 TMEM176AQ96HP8 235 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 APBA2Q99767 749 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 OMDQ99983 421 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 LPIN3Q9BQK8 851 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 STN1Q9H668 368 aaKnown RBP14.98□□□□□ -0.01
COL6A2-201ENST00000300527 MYRFQ9Y2G1 1151 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 PCDHB12Q9Y5F1 795 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 KCNU1A8MYU2 1149 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 OGTO15294 1046 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 AP1G1O43747 822 aa14.98□□□□□ -0.01
COL6A2-201ENST00000300527 TRIM13O60858 407 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms