RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 BACE2Q9Y5Z0 518 aa21.93■■□□□ 1.1
SOX17-201ENST00000297316 FAM169AQ9Y6X4 670 aa21.93■■□□□ 1.1
SOX17-201ENST00000297316 KCNK1O00180 336 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 RTN3O95197 1032 aaPredicted RBP21.92■■□□□ 1.1
SOX17-201ENST00000297316 SF3A3Q12874 501 aaKnown RBP eCLIP21.92■■□□□ 1.1
SOX17-201ENST00000297316 RASA2Q15283 850 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 BRMS1LQ5PSV4 323 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 MZB1Q8WU39 189 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 SERPINB11Q96P15 392 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 YME1L1Q96TA2 773 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 ZBBXA8MT70 800 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 VGLL3A8MV65 326 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 KCNU1A8MYU2 1149 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 HMBSP08397 361 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 TSHRP16473 764 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 TPSB2P20231 275 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 GLUD2P49448 558 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 SMARCB1Q12824 385 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 TPSAB1Q15661 275 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 KBTBD12Q3ZCT8 623 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 MSANTD2Q6P1R3 559 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 ADGRD1Q6QNK2 874 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 C4orf22Q6V702 233 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 BZW1Q7L1Q6 419 aaKnown RBP21.92■■□□□ 1.1
SOX17-201ENST00000297316 PRDM16Q9HAZ2 1276 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 FETUBQ9UGM5 382 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 TTLL3Q9Y4R7 772 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 HS3ST4Q9Y661 456 aa21.92■■□□□ 1.1
SOX17-201ENST00000297316 RPL10AP62906 217 aaKnown RBP21.91■■□□□ 1.1
SOX17-201ENST00000297316 PPP2R5DQ14738 602 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 PDK1Q15118 436 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 KLHL38Q2WGJ6 581 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 TTC31Q49AM3 519 aaPredicted RBP21.91■■□□□ 1.1
SOX17-201ENST00000297316 C10orf120Q5SQS8 335 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 CPLX4Q7Z7G2 160 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 C2orf15Q8WU43 125 aaKnown RBP21.91■■□□□ 1.1
SOX17-201ENST00000297316 SLC39A13Q96H72 371 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 HAPLN3Q96S86 360 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 TLR8Q9NR97 1041 aaKnown RBP21.91■■□□□ 1.1
SOX17-201ENST00000297316 NDFIP2Q9NV92 336 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 WDR4P57081 412 aaKnown RBP21.91■■□□□ 1.1
SOX17-201ENST00000297316 TBX4P57082 545 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 DSG1Q02413 1049 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 PIK3R6Q5UE93 754 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 TAX1BP1Q86VP1 789 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 ZNF567Q8N184 647 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 ARHGAP18Q8N392 663 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 DYDC1Q8WWB3 177 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 SEC16BQ96JE7 1060 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 SIGLEC10Q96LC7 697 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 OXCT2Q9BYC2 517 aaPredicted RBP21.91■■□□□ 1.1
SOX17-201ENST00000297316 MPP6Q9NZW5 540 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 TLR6Q9Y2C9 796 aa21.91■■□□□ 1.1
SOX17-201ENST00000297316 NR1H3Q13133 447 aa21.9■■□□□ 1.1
SOX17-201ENST00000297316 CMTR2Q8IYT2 770 aaKnown RBP21.9■■□□□ 1.1
SOX17-201ENST00000297316 FRMD8Q9BZ67 464 aaPredicted RBP21.9■■□□□ 1.1
SOX17-201ENST00000297316 PPCSQ9HAB8 311 aa21.9■■□□□ 1.1
SOX17-201ENST00000297316 IL23AQ9NPF7 189 aa21.9■■□□□ 1.1
SOX17-201ENST00000297316 PIH1D1Q9NWS0 290 aaKnown RBP21.9■■□□□ 1.1
SOX17-201ENST00000297316 SPG21Q9NZD8 308 aa21.9■■□□□ 1.1
SOX17-201ENST00000297316 ZC3H7BQ9UGR2 993 aaKnown RBP21.9■■□□□ 1.1
SOX17-201ENST00000297316 PSMB4P28070 264 aa21.9■■□□□ 1.1
SOX17-201ENST00000297316 PDCD7Q8N8D1 485 aaKnown RBP21.9■■□□□ 1.1
SOX17-201ENST00000297316 CYTH2Q99418 400 aa21.9■■□□□ 1.1
SOX17-201ENST00000297316 CLIC5Q9NZA1 410 aa21.9■■□□□ 1.1
SOX17-201ENST00000297316 CXXC1Q9P0U4 656 aaPredicted RBP21.9■■□□□ 1.1
SOX17-201ENST00000297316 DOCK4Q8N1I0 1966 aa21.89■■□□□ 1.1
SOX17-201ENST00000297316 FAM47DPA6NHR8 397 aa21.89■■□□□ 1.1
SOX17-201ENST00000297316 PPP1R12AO14974 1030 aaPredicted RBP21.89■■□□□ 1.1
SOX17-201ENST00000297316 VIMP08670 466 aaKnown RBP21.89■■□□□ 1.1
SOX17-201ENST00000297316 MSH2P43246 934 aa21.89■■□□□ 1.1
SOX17-201ENST00000297316 MANEALQ5VSG8 457 aa21.89■■□□□ 1.1
SOX17-201ENST00000297316 ARHGAP36Q6ZRI8 547 aa21.89■■□□□ 1.1
SOX17-201ENST00000297316 ZNF461Q8TAF7 563 aa21.89■■□□□ 1.1
SOX17-201ENST00000297316 CKAP2Q8WWK9 683 aa21.89■■□□□ 1.1
SOX17-201ENST00000297316 BADQ92934 168 aa21.89■■□□□ 1.1
SOX17-201ENST00000297316 CYP4F11Q9HBI6 524 aa21.89■■□□□ 1.1
SOX17-201ENST00000297316 SMYD2Q9NRG4 433 aa21.89■■□□□ 1.1
SOX17-201ENST00000297316 MARCH2Q9P0N8 246 aa21.89■■□□□ 1.1
SOX17-201ENST00000297316 CXorf49A8MYA2 514 aaPredicted RBP21.89■■□□□ 1.09
SOX17-201ENST00000297316 ABLIM3O94929 683 aa21.89■■□□□ 1.09
SOX17-201ENST00000297316 ATP2A2P16615 1042 aaKnown RBP21.89■■□□□ 1.09
SOX17-201ENST00000297316 LAG3P18627 525 aa21.89■■□□□ 1.09
SOX17-201ENST00000297316 UNC5AQ6ZN44 842 aa21.89■■□□□ 1.09
SOX17-201ENST00000297316 DENND1AQ8TEH3 1009 aa21.89■■□□□ 1.09
SOX17-201ENST00000297316 AFF4Q9UHB7 1163 aaKnown RBP21.89■■□□□ 1.09
SOX17-201ENST00000297316 NYNRINQ9P2P1 1898 aaKnown RBP21.88■■□□□ 1.09
SOX17-201ENST00000297316 TCP11X1B4DZS4 312 aa21.88■■□□□ 1.09
SOX17-201ENST00000297316 E9PAM4 449 aa21.88■■□□□ 1.09
SOX17-201ENST00000297316 OPHN1O60890 802 aa21.88■■□□□ 1.09
SOX17-201ENST00000297316 FAM155BO75949 473 aa21.88■■□□□ 1.09
SOX17-201ENST00000297316 ZDHHC11BP0C7U3 371 aa21.88■■□□□ 1.09
SOX17-201ENST00000297316 TUBP50607 506 aa21.88■■□□□ 1.09
SOX17-201ENST00000297316 C6orf89Q6UWU4 347 aa21.88■■□□□ 1.09
SOX17-201ENST00000297316 KLF6Q99612 283 aaPredicted RBP21.88■■□□□ 1.09
SOX17-201ENST00000297316 GORASP1Q9BQQ3 440 aa21.88■■□□□ 1.09
SOX17-201ENST00000297316 HERC2P3Q9BVR0 1158 aa21.88■■□□□ 1.09
SOX17-201ENST00000297316 NKIRAS1Q9NYS0 192 aa21.88■■□□□ 1.09
SOX17-201ENST00000297316 VANGL2Q9ULK5 521 aa21.88■■□□□ 1.09
SOX17-201ENST00000297316 SLC12A8A0AV02 714 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms