RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 OPHN1O60890 802 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 ENTPD5O75356 428 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 LHX1P48742 406 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 GPR15P49685 360 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 CACNB2Q08289 660 aaPredicted RBP12.07□□□□□ -0.48
RHO-201ENST00000296271 LPIN1Q14693 890 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 PARP6Q2NL67 630 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 TEX44Q53QW1 395 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 N4BP2L1Q5TBK1 243 aaPredicted RBP12.07□□□□□ -0.48
RHO-201ENST00000296271 STEAP4Q687X5 459 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 RINLQ6ZS11 566 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 RASSF3Q86WH2 238 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 ZNF280BQ86YH2 543 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 KIRREL3Q8IZU9 778 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 TNS4Q8IZW8 715 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 ZNF669Q96BR6 464 aaPredicted RBP12.07□□□□□ -0.48
RHO-201ENST00000296271 OXCT2Q9BYC2 517 aaPredicted RBP12.07□□□□□ -0.48
RHO-201ENST00000296271 FRMD8Q9BZ67 464 aaPredicted RBP12.07□□□□□ -0.48
RHO-201ENST00000296271 LRMDAQ9H2I8 198 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 TXLNGQ9NUQ3 528 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 HACD1B0YJ81 288 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 H0Y3Z8 333 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 ALDH1A2O94788 518 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 MT-CYBP00156 380 aaPredicted RBP12.07□□□□□ -0.48
RHO-201ENST00000296271 FDFT1P37268 417 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 IRF9Q00978 393 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 ZBTB16Q05516 673 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 HSP90AA5PQ58FG0 334 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 TREML1Q86YW5 311 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 CNTD1Q8N815 330 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 DNAAF3Q8N9W5 541 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 DQX1Q8TE96 717 aaKnown RBP12.07□□□□□ -0.48
RHO-201ENST00000296271 SKA1Q96BD8 255 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 B3GALT6Q96L58 329 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 UNKQ9C0B0 810 aaKnown RBP12.07□□□□□ -0.48
RHO-201ENST00000296271 CNGB3Q9NQW8 809 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 SLC38A7Q9NVC3 462 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 TMEM216Q9P0N5 145 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 RCOR3Q9P2K3 495 aaPredicted RBP12.07□□□□□ -0.48
RHO-201ENST00000296271 Q9Y3F1 56 aa12.07□□□□□ -0.48
RHO-201ENST00000296271 DFFAO00273 331 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 PPP1R12AO14974 1030 aaPredicted RBP12.06□□□□□ -0.48
RHO-201ENST00000296271 MOCS2O96007 188 aaPredicted RBP12.06□□□□□ -0.48
RHO-201ENST00000296271 BPGMP07738 259 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 ITGA2BP08514 1039 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 CDC25CP30307 473 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 CBLBQ13191 982 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 FASTKD1Q53R41 847 aaKnown RBP12.06□□□□□ -0.48
RHO-201ENST00000296271 ZSCAN18Q8TBC5 510 aaPredicted RBP12.06□□□□□ -0.48
RHO-201ENST00000296271 SMARCD1Q96GM5 515 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 ATXN3LQ9H3M9 355 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 SIRPGQ9P1W8 387 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 CDH9Q9ULB4 789 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 FCHO1O14526 889 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 ADAMTS4O75173 837 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 SOAT2O75908 522 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 HAUS5O94927 633 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 ANP32DO95626 131 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 PGAM1P18669 254 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 AQP5P55064 265 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 CDK16Q00536 496 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 OCRLQ01968 901 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 CADM1Q9BY67 442 aaKnown RBP12.06□□□□□ -0.48
RHO-201ENST00000296271 NMUR1Q9HB89 426 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 ZFYVE28Q9HCC9 887 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 OSER1Q9NX31 292 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 MPP6Q9NZW5 540 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 ZFATQ9P243 1243 aa12.06□□□□□ -0.48
RHO-201ENST00000296271 MTO1Q9Y2Z2 717 aaKnown RBP12.06□□□□□ -0.48
RHO-201ENST00000296271 TDRD15B5MCY1 1934 aaKnown RBP12.05□□□□□ -0.48
RHO-201ENST00000296271 EIF4E1BA6NMX2 242 aaKnown RBP12.05□□□□□ -0.48
RHO-201ENST00000296271 FAM155AB1AL88 458 aaPredicted RBP12.05□□□□□ -0.48
RHO-201ENST00000296271 STK10O94804 968 aaKnown RBP12.05□□□□□ -0.48
RHO-201ENST00000296271 SAT1P21673 171 aa12.05□□□□□ -0.48
RHO-201ENST00000296271 NMBRP28336 390 aa12.05□□□□□ -0.48
RHO-201ENST00000296271 CRHR1P34998 444 aa12.05□□□□□ -0.48
RHO-201ENST00000296271 GARSP41250 739 aaKnown RBP12.05□□□□□ -0.48
RHO-201ENST00000296271 CXCR3P49682 368 aa12.05□□□□□ -0.48
RHO-201ENST00000296271 SARNPP82979 210 aaKnown RBP12.05□□□□□ -0.48
RHO-201ENST00000296271 PDE1BQ01064 536 aa12.05□□□□□ -0.48
RHO-201ENST00000296271 UBAP2LQ14157 1087 aaKnown RBP12.05□□□□□ -0.48
RHO-201ENST00000296271 PREPLQ4J6C6 727 aaPredicted RBP12.05□□□□□ -0.48
RHO-201ENST00000296271 INTS6LQ5JSJ4 861 aaKnown RBP12.05□□□□□ -0.48
RHO-201ENST00000296271 LGSNQ5TDP6 509 aa12.05□□□□□ -0.48
RHO-201ENST00000296271 VWA5B1Q5TIE3 1220 aa12.05□□□□□ -0.48
RHO-201ENST00000296271 FAM219BQ5XKK7 198 aa12.05□□□□□ -0.48
RHO-201ENST00000296271 MARK2Q7KZI7 788 aaKnown RBP12.05□□□□□ -0.48
RHO-201ENST00000296271 RTN4RL1Q86UN2 441 aaPredicted RBP12.05□□□□□ -0.48
RHO-201ENST00000296271 C10orf107Q8IVU9 208 aa12.05□□□□□ -0.48
RHO-201ENST00000296271 TMEM86AQ8N2M4 240 aa12.05□□□□□ -0.48
RHO-201ENST00000296271 TTC9BQ8N6N2 239 aa12.05□□□□□ -0.48
RHO-201ENST00000296271 SOCS4Q8WXH5 440 aa12.05□□□□□ -0.48
RHO-201ENST00000296271 CASP10Q92851 521 aa12.05□□□□□ -0.48
RHO-201ENST00000296271 PTCD3Q96EY7 689 aaKnown RBP12.05□□□□□ -0.48
RHO-201ENST00000296271 CERS2Q96G23 380 aa12.05□□□□□ -0.48
RHO-201ENST00000296271 PKMYT1Q99640 499 aa12.05□□□□□ -0.48
RHO-201ENST00000296271 DENND2DQ9H6A0 471 aaPredicted RBP12.05□□□□□ -0.48
RHO-201ENST00000296271 HCSTQ9UBK5 93 aa12.05□□□□□ -0.48
RHO-201ENST00000296271 NEU3Q9UQ49 428 aa12.05□□□□□ -0.48
RHO-201ENST00000296271 ZCWPW2A0A1B0GU75 182 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms