RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 SPATA6LQ8N4H0 392 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 SMC1BQ8NDV3 1235 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 STKLD1Q8NE28 680 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 FLCNQ8NFG4 579 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 SLC16A10Q8TF71 515 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 NT5C1AQ9BXI3 368 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 KLC2Q9H0B6 622 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 GPRC5DQ9NZD1 345 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 LNPEPQ9UIQ6 1025 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 MTO1Q9Y2Z2 717 aaKnown RBP13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 SNX10Q9Y5X0 201 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 PAPPA2Q9BXP8 1791 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 DNAJC6O75061 913 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 TPH1P17752 444 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 BTF3P20290 206 aaKnown RBP13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 SLC18A1P54219 525 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 POLE2P56282 527 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 PDE1BQ01064 536 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 DYNC1I2Q13409 638 aaKnown RBP13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 CAMK2BQ13554 666 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 MAP7Q14244 749 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 KDELC2Q7Z4H8 507 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 APOBEC3FQ8IUX4 373 aaKnown RBP13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 LENG1Q96BZ8 264 aaPredicted RBP13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 LZTS1Q9Y250 596 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 NEMP1O14524 444 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 ALDOAP04075 364 aaKnown RBP13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 ARSAP15289 507 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 ADCYAP1R1P41586 468 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 WASHC2DQ5SRD0 308 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 FOXB2Q5VYV0 432 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 IZUMO2Q6UXV1 221 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 UNC5DQ6UXZ4 953 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 RAPH1Q70E73 1250 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 ULK2Q8IYT8 1036 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 PLD6Q8N2A8 252 aaKnown RBP13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 CHST13Q8NET6 341 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 MARK4Q96L34 752 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 C12orf42Q96LP6 360 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 KCTD15Q96SI1 283 aaPredicted RBP13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 TBCBQ99426 244 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 AGAP2Q99490 1192 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 SAR1AQ9NR31 198 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 PAK5Q9P286 719 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 STK39Q9UEW8 545 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 ANK1P16157 1881 aa13.61□□□□□ -0.23
KCNIP3-201ENST00000295225 CARNS1A5YM72 827 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 A8MXQ7 604 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 DGKIO75912 1065 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 C22orf31O95567 290 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 VHLP40337 213 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 AP3M2P53677 418 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 KLC1Q07866 573 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 STX3Q13277 289 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 PHTF2Q8N3S3 785 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 ENDOVQ8N8Q3 282 aaKnown RBP13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 FNIP1Q8TF40 1166 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 GBA2Q9HCG7 927 aaPredicted RBP13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 DTLQ9NZJ0 730 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 TMEM216Q9P0N5 145 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 AP4E1Q9UPM8 1137 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 HBS1LQ9Y450 684 aaKnown RBP13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 A6NHS1 94 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 E9PBE3 544 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 TRAFD1O14545 582 aaPredicted RBP13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 MFSD11O43934 449 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 KLHL41O60662 606 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 CLASP2O75122 1294 aaKnown RBP13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 WFS1O76024 890 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 BEST1O76090 585 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 PROCP04070 461 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 ETS2P15036 469 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 SP100P23497 879 aaPredicted RBP13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 PSMB4P28070 264 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 IRF9Q00978 393 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 OCRLQ01968 901 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 SLC34A1Q06495 639 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 ITGA9Q13797 1035 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 PDE1CQ14123 709 aaPredicted RBP13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 TFDP2Q14188 446 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 SURF1Q15526 300 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 TEX44Q53QW1 395 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 EGFLAMQ63HQ2 1017 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 MAVSQ7Z434 540 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 CRLF3Q8IUI8 442 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 SCUBE1Q8IWY4 988 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 PPP2R3CQ969Q6 453 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 TBC1D20Q96BZ9 403 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 NR1H4Q96RI1 486 aaPredicted RBP13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 NXF3Q9H4D5 531 aaKnown RBP13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 RBPJLQ9UBG7 517 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 STOML1Q9UBI4 398 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 EMCNQ9ULC0 261 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 DOCK1Q14185 1865 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 IGKV6-21A0A0C4DH24 114 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 IQCA1LA6NCM1 817 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 A6NJR5 290 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 CHADO15335 359 aa13.6□□□□□ -0.23
KCNIP3-201ENST00000295225 RNASEH2AO75792 299 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms