RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 VOPP1Q96AW1 172 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 FAM122AQ96E09 287 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 MRGPRX3Q96LB0 322 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 CFAP57Q96MR6 1250 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 C11orf70Q9BRQ4 267 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 TMPRSS4Q9NRS4 437 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 TMEM51Q9NW97 253 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 ADAM22Q9P0K1 906 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 ARHGAP20Q9P2F6 1191 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 TBC1D30Q9Y2I9 924 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 HS3ST4Q9Y661 456 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 CEP250Q9BV73 2442 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.47□□□□□ -0.89
HMGN1-201ENST00000288344 FAM170AA1A519 330 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 TMEM191CA6NGB0 347 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 KLF8O95600 359 aaPredicted RBP9.47□□□□□ -0.89
HMGN1-201ENST00000288344 PLEKP08567 350 aaPredicted RBP9.47□□□□□ -0.89
HMGN1-201ENST00000288344 SLC2A3P11169 496 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 KRT3P12035 628 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 RRM1P23921 792 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 NTSR1P30989 418 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 GBP1P32455 592 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 CNR2P34972 360 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 ADRA1BP35368 520 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 MRE11P49959 708 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 NRLP54845 237 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 SEC13P55735 322 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 RNASE9P60153 205 aaKnown RBP9.47□□□□□ -0.89
HMGN1-201ENST00000288344 KDSRQ06136 332 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 ZNF252P-AS1Q0IIN9 211 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 SRSF5Q13243 272 aaKnown RBP9.47□□□□□ -0.89
HMGN1-201ENST00000288344 MAMLD1Q13495 774 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 EIF4HQ15056 248 aaKnown RBP9.47□□□□□ -0.89
HMGN1-201ENST00000288344 C15orf59Q2T9L4 293 aaPredicted RBP9.47□□□□□ -0.89
HMGN1-201ENST00000288344 PREPLQ4J6C6 727 aaPredicted RBP9.47□□□□□ -0.89
HMGN1-201ENST00000288344 C10orf76Q5T2E6 689 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 FAM102AQ5T9C2 384 aaPredicted RBP9.47□□□□□ -0.89
HMGN1-201ENST00000288344 SFMBT2Q5VUG0 894 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 RAP1GAP2Q684P5 730 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 CYP4V2Q6ZWL3 525 aaPredicted RBP9.47□□□□□ -0.89
HMGN1-201ENST00000288344 STRADAQ7RTN6 431 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 PHLDB2Q86SQ0 1253 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 VSTM4Q8IW00 320 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 CFAP52Q8N1V2 620 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 ZNF513Q8N8E2 541 aaPredicted RBP9.47□□□□□ -0.89
HMGN1-201ENST00000288344 SORCS1Q8WY21 1168 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 IQCDQ96DY2 449 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 ZC3H10Q96K80 434 aaKnown RBP9.47□□□□□ -0.89
HMGN1-201ENST00000288344 HAPLN3Q96S86 360 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 DNAJC7Q99615 494 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 RBSNQ9H1K0 784 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 WDCPQ9H6R7 721 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 SPEGQ15772 3267 aa9.47□□□□□ -0.89
HMGN1-201ENST00000288344 A0A087X0T9 212 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 GOLGA6L19H0YKK7 550 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 GOLGA8SH3BPF8 625 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 NPC1O15118 1278 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 TBL1XO60907 577 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 CNTN5O94779 1100 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 FTLP02792 175 aaPredicted RBP9.46□□□□□ -0.9
HMGN1-201ENST00000288344 CCDC172P0C7W6 258 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 CCNYL3P0C7X3 344 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 FAM228BP0C875 321 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 PDGFRAP16234 1089 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 TNFAIP3P21580 790 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 CASP14P31944 242 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 IL12RB1P42701 662 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 PXNP49023 591 aaPredicted RBP9.46□□□□□ -0.9
HMGN1-201ENST00000288344 DGKEP52429 567 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 ZNF143P52747 638 aaPredicted RBP9.46□□□□□ -0.9
HMGN1-201ENST00000288344 SCAPQ12770 1279 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 LMAN2Q12907 356 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 SEMA3BQ13214 749 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 NME3Q13232 169 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 MTA1Q13330 715 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 ZNF234Q14588 700 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 ASIC2Q16515 512 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 MAP7D1Q3KQU3 841 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 ALFQ53S48 1182 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 APCDD1Q8J025 514 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 ATP6V0D2Q8N8Y2 350 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 MDGA1Q8NFP4 955 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 ACDQ96AP0 544 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 TRIM7Q9C029 511 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 TKTL2Q9H0I9 626 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 OSBPL2Q9H1P3 480 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 PDCL3Q9H2J4 239 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 METTL5Q9NRN9 209 aaKnown RBP9.46□□□□□ -0.9
HMGN1-201ENST00000288344 ABCB8Q9NUT2 735 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 ADAMTS1Q9UHI8 967 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 SNX10Q9Y5X0 201 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 BZW2Q9Y6E2 419 aaKnown RBP9.46□□□□□ -0.9
HMGN1-201ENST00000288344 STON1Q9Y6Q2 735 aa9.46□□□□□ -0.9
HMGN1-201ENST00000288344 FAM72CH0Y354 149 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 RTN2O75298 545 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 LUC7L3O95232 432 aaKnown RBP9.45□□□□□ -0.9
HMGN1-201ENST00000288344 APBB3O95704 486 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 APOEP02649 317 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 CYBBP04839 570 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 SERPING1P05155 500 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms