RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 STX16-NPEPL1H3BU86 382 aa13.71□□□□□ -0.22
SCAF4-201ENST00000286835 CTSHP09668 335 aa13.71□□□□□ -0.22
SCAF4-201ENST00000286835 ARL2P36404 184 aa13.71□□□□□ -0.22
SCAF4-201ENST00000286835 RPL5P46777 297 aaKnown RBP13.71□□□□□ -0.22
SCAF4-201ENST00000286835 SPOUT1Q5T280 376 aaKnown RBP13.71□□□□□ -0.22
SCAF4-201ENST00000286835 PPP1R26Q5T8A7 1209 aaPredicted RBP13.71□□□□□ -0.22
SCAF4-201ENST00000286835 TMEM198Q66K66 360 aa13.71□□□□□ -0.22
SCAF4-201ENST00000286835 AMIGO2Q86SJ2 522 aa13.71□□□□□ -0.22
SCAF4-201ENST00000286835 OXCT2Q9BYC2 517 aaPredicted RBP13.71□□□□□ -0.22
SCAF4-201ENST00000286835 SIK2Q9H0K1 926 aa13.71□□□□□ -0.22
SCAF4-201ENST00000286835 SMARCAD1Q9H4L7 1026 aa13.71□□□□□ -0.22
SCAF4-201ENST00000286835 COPG2Q9UBF2 871 aa13.71□□□□□ -0.22
SCAF4-201ENST00000286835 BARX2Q9UMQ3 279 aaPredicted RBP13.71□□□□□ -0.22
SCAF4-201ENST00000286835 ARHGEF37A1IGU5 675 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 SPATA31C2B4DYI2 1134 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 CRCPO75575 148 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 RGS20O76081 388 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 DHRS4L1P0CG22 281 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 PLOD1Q02809 727 aaPredicted RBP13.7□□□□□ -0.22
SCAF4-201ENST00000286835 PPIDQ08752 370 aaKnown RBP13.7□□□□□ -0.22
SCAF4-201ENST00000286835 DGKDQ16760 1214 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 TEDDM1Q5T9Z0 273 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 PMF1Q6P1K2 205 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 B3GNT6Q6ZMB0 384 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 PDSS2Q86YH6 399 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 AFAP1L2Q8N4X5 818 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 COPS5Q92905 334 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 HDAC11Q96DB2 347 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 LRRC39Q96DD0 335 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 SIRPGQ9P1W8 387 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 MFHAS1Q9Y4C4 1052 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 RGS2P41220 211 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 PLK1P53350 603 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 SLC9B1Q4ZJI4 515 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 PDZD4Q76G19 769 aaPredicted RBP13.7□□□□□ -0.22
SCAF4-201ENST00000286835 NPAS2Q99743 824 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 EFHD1Q9BUP0 239 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 TMEM134Q9H6X4 195 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 GIPC1O14908 333 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 ITGAXP20702 1163 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 CRABP2P29373 138 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 MAPK10P53779 464 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 MPP3Q13368 585 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 HABP4Q5JVS0 413 aaKnown RBP13.7□□□□□ -0.22
SCAF4-201ENST00000286835 TREML2Q5T2D2 321 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.7□□□□□ -0.229e-7■■■□□ 16.3
SCAF4-201ENST00000286835 FNIP1Q8TF40 1166 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 MZB1Q8WU39 189 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 ZFAND2BQ8WV99 257 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 DGCR14Q96DF8 476 aaKnown RBP13.7□□□□□ -0.22
SCAF4-201ENST00000286835 TMEM79Q9BSE2 394 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 NMRAL1Q9HBL8 299 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 ATXN10Q9UBB4 475 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 ZNF180Q9UJW8 692 aa13.7□□□□□ -0.22
SCAF4-201ENST00000286835 GNEQ9Y223 722 aaKnown RBP13.7□□□□□ -0.22
SCAF4-201ENST00000286835 C3orf70A6NLC5 250 aaPredicted RBP13.69□□□□□ -0.22
SCAF4-201ENST00000286835 IL18RAPO95256 599 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 TNFAIP8O95379 198 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 CCDC130P13994 396 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 CATSPERGQ6ZRH7 1159 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 CLEC4CQ8WTT0 213 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 UPF3AQ9H1J1 476 aaKnown RBP13.69□□□□□ -0.22
SCAF4-201ENST00000286835 WDR41Q9HAD4 459 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 EFCAB1Q9HAE3 211 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 KLK14Q9P0G3 267 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 SORCS3Q9UPU3 1222 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 M0QYT0 321 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 ACKR2O00590 384 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 CXCL11O14625 94 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 CHRNGP07510 517 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 CNTFP26441 200 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 PIK3R1P27986 724 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 SERPINB8P50452 374 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 C11orf91Q3C1V1 193 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 HSDL1Q3SXM5 330 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 ZNF786Q8N393 782 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 OR52B2Q96RD2 323 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 DHRS4Q9BTZ2 278 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 LHX5Q9H2C1 402 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 CHST12Q9NRB3 414 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 CCDC167Q9P0B6 97 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 NDUFA13Q9P0J0 144 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 MID2Q9UJV3 735 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 CPSF3Q9UKF6 684 aaKnown RBP13.69□□□□□ -0.22
SCAF4-201ENST00000286835 C2CD4BA6NLJ0 364 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 SPDYE16A6NNV3 312 aaPredicted RBP13.69□□□□□ -0.22
SCAF4-201ENST00000286835 KLF11O14901 512 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 TMCC1O94876 653 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 HOXC6P09630 235 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 ME2P23368 584 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 CCR10P46092 362 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 SLC6A3Q01959 620 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 PAOXQ6QHF9 649 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 TSHZ1Q6ZSZ6 1077 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.69□□□□□ -0.229e-6■■■■□ 26.1
SCAF4-201ENST00000286835 PDZD8Q8NEN9 1154 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 LENG1Q96BZ8 264 aaPredicted RBP13.69□□□□□ -0.22
SCAF4-201ENST00000286835 CERS2Q96G23 380 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 APBA2Q99767 749 aa13.69□□□□□ -0.22
SCAF4-201ENST00000286835 HAUS8Q9BT25 410 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms