RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 RBM7Q9Y580 266 aaKnown RBP8.89□□□□□ -0.99
NIPBL-201ENST00000282516 PTPRKQ15262 1439 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 RLN1P04808 185 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 S100A3P33764 101 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 NAA20P61599 178 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 BSNDQ8WZ55 320 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 DGCR6LQ9BY27 220 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 ZNF518BQ9C0D4 1074 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 RASSF1Q9NS23 344 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 ETAA1Q9NY74 926 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 A0A087WZ62 844 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 PER1O15534 1290 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-201ENST00000282516 FARP2O94887 1054 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-201ENST00000282516 LRPAP1P30533 357 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 CSHL1Q14406 222 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 REXO1L1PQ8IX06 675 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 C17orf75Q9HAS0 396 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 XPR1Q9UBH6 696 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 NDOR1Q9UHB4 597 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 DPP7Q9UHL4 492 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 USP18Q9UMW8 372 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 SNX6Q9UNH7 406 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 ST3GAL5Q9UNP4 418 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 TMEM2Q9UHN6 1383 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 C2CD2LO14523 706 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 AP1S1P61966 158 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 RGS1Q08116 209 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 MYBPC3Q14896 1274 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 MFSD7Q6UXD7 560 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 NANOGNBQ7Z5D8 188 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 GAL3ST3Q96A11 431 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 BTBD10Q9BSF8 475 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 POLD4Q9HCU8 107 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 TRIM10Q9UDY6 481 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 UBQLN1Q9UMX0 589 aaKnown RBP8.89□□□□□ -0.99
NIPBL-201ENST00000282516 UNC13AQ9UPW8 1703 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 WRBO00258 174 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 ADRA2BP18089 450 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 ITGB6P18564 788 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 ME2P23368 584 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 PDHA2P29803 388 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 NR2C2P49116 596 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 NR1I3Q14994 352 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 ADGRF2Q8IZF7 708 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 ZFP28Q8NHY6 868 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 ALDH8A1Q9H2A2 487 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-201ENST00000282516 QTRT2Q9H974 415 aaKnown RBP8.89□□□□□ -0.99
NIPBL-201ENST00000282516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.88□□□□□ -0.99
NIPBL-201ENST00000282516 F5H6K3 240 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 TMCC2O75069 709 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 SEC22BO75396 215 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 ATP6V1G2O95670 118 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 PGK1P00558 417 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 COX7A2P14406 83 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 KLRC3Q07444 240 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 KLHDC7AQ5VTJ3 777 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 STK40Q8N2I9 435 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 LEMD2Q8NC56 503 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 CCDC115Q96NT0 180 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 EXO5Q9H790 373 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 THG1LQ9NWX6 298 aaKnown RBP8.88□□□□□ -0.99
NIPBL-201ENST00000282516 TNPO3Q9Y5L0 923 aaKnown RBP8.88□□□□□ -0.99
NIPBL-201ENST00000282516 NRKQ7Z2Y5 1582 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 ARHGEF5Q12774 1597 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 A0A087X1B8 175 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 C19orf81C9J6K1 198 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 KMOO15229 486 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 SNAP91O60641 907 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 MCL1Q07820 350 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 CBWD3Q5JTY5 395 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 CBWD5Q5RIA9 395 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 GRTP1Q5TC63 336 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 C11orf63Q6NUN7 778 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 SHC4Q6S5L8 630 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 FAM136AQ96C01 138 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 ADGRL2O95490 1459 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 ICE1Q9Y2F5 2266 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 MAGEB3O15480 346 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 MYBPC1Q00872 1141 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 PPIL2Q13356 520 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 PKN1Q16512 942 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 SIX5Q8N196 739 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 SLC44A5Q8NCS7 719 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 TEX47Q8TBZ9 253 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 NEUROD4Q9HD90 331 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 TBX20Q9UMR3 447 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 MRASO14807 208 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 MSH4O15457 936 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 PLOD3O60568 738 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 MED24O75448 989 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 SERPINA1P01009 418 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 ALDH3A2P51648 485 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 CCNG2Q16589 344 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 HIPK1Q86Z02 1210 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 PRCCQ92733 491 aaPredicted RBP8.88□□□□□ -0.99
NIPBL-201ENST00000282516 C15orf41Q9Y2V0 281 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 ZC3H11AO75152 810 aaKnown RBP eCLIP8.88□□□□□ -0.99
NIPBL-201ENST00000282516 RHOCP08134 193 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 ZNF37AP17032 561 aaPredicted RBP8.88□□□□□ -0.99
NIPBL-201ENST00000282516 CDH4P55283 916 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms