RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 C1SP09871 688 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 LCP1P13796 627 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 TYRP14679 529 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 PON1P27169 355 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 CORO1AP31146 461 aaKnown RBP12.8□□□□□ -0.36
MRPS28-201ENST00000276585 GPD2P43304 727 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 SLC8A3P57103 927 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 TRIP4Q15650 581 aaPredicted RBP12.8□□□□□ -0.36
MRPS28-201ENST00000276585 ANO4Q32M45 955 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 FYB2Q5VWT5 728 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 BSPRYQ5W0U4 402 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 MSANTD2Q6P1R3 559 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 DENND1BQ6P3S1 775 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 TADA2BQ86TJ2 420 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 DHX40Q8IX18 779 aaKnown RBP12.8□□□□□ -0.36
MRPS28-201ENST00000276585 SHC3Q92529 594 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 EDEM1Q92611 657 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 IGSF8Q969P0 613 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.8□□□□□ -0.36
MRPS28-201ENST00000276585 BBS2Q9BXC9 721 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 CD248Q9HCU0 757 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 UBE2TQ9NPD8 197 aaPredicted RBP12.8□□□□□ -0.36
MRPS28-201ENST00000276585 APEX2Q9UBZ4 518 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 SEPT3Q9UH03 358 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 FBXO10Q9UK96 956 aa12.8□□□□□ -0.36
MRPS28-201ENST00000276585 AGO1Q9UL18 857 aaKnown RBP12.8□□□□□ -0.36
MRPS28-201ENST00000276585 SLC12A8A0AV02 714 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 PRRT4C9JH25 899 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 H0Y8X5 98 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 MSI1O43347 362 aaKnown RBP12.79□□□□□ -0.36
MRPS28-201ENST00000276585 CISD3P0C7P0 127 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 GLDCP23378 1020 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 ERCC5P28715 1186 aaPredicted RBP12.79□□□□□ -0.36
MRPS28-201ENST00000276585 CCR10P46092 362 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 NFKB2Q00653 900 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 GOLGA8FQ08AF8 430 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 GOLGA8DPQ0D2H9 430 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 SERINC3Q13530 473 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 STILQ15468 1287 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 MEA1Q16626 185 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 MAN2A1Q16706 1144 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 HSP90AA4PQ58FG1 418 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 GRAMD4Q6IC98 578 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 FBXL19Q6PCT2 694 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 GBP6Q6ZN66 633 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 TPGS1Q6ZTW0 290 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 SIX6OS1Q8N1H7 587 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 BHMTQ93088 406 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 HSFY1Q96LI6 401 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 DNAJC17Q9NVM6 304 aaKnown RBP12.79□□□□□ -0.36
MRPS28-201ENST00000276585 PLK2Q9NYY3 685 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 SFMBT1Q9UHJ3 866 aa12.79□□□□□ -0.36
MRPS28-201ENST00000276585 IGLV3-27P01718 113 aa12.78□□□□□ -0.36
MRPS28-201ENST00000276585 PNMA6AP0CW24 399 aaPredicted RBP12.78□□□□□ -0.36
MRPS28-201ENST00000276585 KRT5P13647 590 aa12.78□□□□□ -0.36
MRPS28-201ENST00000276585 OXTRP30559 389 aa12.78□□□□□ -0.36
MRPS28-201ENST00000276585 MTIF2P46199 727 aaKnown RBP12.78□□□□□ -0.36
MRPS28-201ENST00000276585 ACADVLP49748 655 aa12.78□□□□□ -0.36
MRPS28-201ENST00000276585 COG7P83436 770 aa12.78□□□□□ -0.36
MRPS28-201ENST00000276585 EXOC3L4Q17RC7 722 aa12.78□□□□□ -0.36
MRPS28-201ENST00000276585 RSRC2Q7L4I2 434 aaKnown RBP12.78□□□□□ -0.36
MRPS28-201ENST00000276585 ENOSF1Q7L5Y1 443 aa12.78□□□□□ -0.36
MRPS28-201ENST00000276585 DENND1CQ8IV53 801 aa12.78□□□□□ -0.36
MRPS28-201ENST00000276585 CPXM2Q8N436 756 aa12.78□□□□□ -0.36
MRPS28-201ENST00000276585 ZNF606Q8WXB4 792 aa12.78□□□□□ -0.36
MRPS28-201ENST00000276585 IRGQQ8WZA9 623 aa12.78□□□□□ -0.36
MRPS28-201ENST00000276585 TSC1Q92574 1164 aa12.78□□□□□ -0.36
MRPS28-201ENST00000276585 PLD4Q96BZ4 506 aa12.78□□□□□ -0.36
MRPS28-201ENST00000276585 PIWIL1Q96J94 861 aaKnown RBP12.78□□□□□ -0.36
MRPS28-201ENST00000276585 ZNF578Q96N58 590 aaPredicted RBP12.78□□□□□ -0.36
MRPS28-201ENST00000276585 IPO9Q96P70 1041 aaKnown RBP12.78□□□□□ -0.36
MRPS28-201ENST00000276585 GABRG3Q99928 467 aa12.78□□□□□ -0.36
MRPS28-201ENST00000276585 SAMSN1Q9NSI8 373 aaKnown RBP12.78□□□□□ -0.36
MRPS28-201ENST00000276585 TJP2Q9UDY2 1190 aa12.78□□□□□ -0.36
MRPS28-201ENST00000276585 CLEC4EQ9ULY5 219 aa12.78□□□□□ -0.36
MRPS28-201ENST00000276585 CLCA2Q9UQC9 943 aa12.78□□□□□ -0.36
MRPS28-201ENST00000276585 STARD13Q9Y3M8 1113 aa12.78□□□□□ -0.36
MRPS28-201ENST00000276585 HBS1LQ9Y450 684 aaKnown RBP12.78□□□□□ -0.36
MRPS28-201ENST00000276585 PAPSS1O43252 624 aaPredicted RBP12.77□□□□□ -0.37
MRPS28-201ENST00000276585 LETM1O95202 739 aaPredicted RBP12.77□□□□□ -0.37
MRPS28-201ENST00000276585 LTFP02788 710 aa12.77□□□□□ -0.37
MRPS28-201ENST00000276585 CR2P20023 1033 aa12.77□□□□□ -0.37
MRPS28-201ENST00000276585 KCNMA1Q12791 1236 aa12.77□□□□□ -0.37
MRPS28-201ENST00000276585 STARD3Q14849 445 aa12.77□□□□□ -0.37
MRPS28-201ENST00000276585 ARHGAP44Q17R89 818 aa12.77□□□□□ -0.37
MRPS28-201ENST00000276585 LAYNQ6UX15 382 aa12.77□□□□□ -0.37
MRPS28-201ENST00000276585 ADAT2Q7Z6V5 191 aaKnown RBP12.77□□□□□ -0.37
MRPS28-201ENST00000276585 GATAD2AQ86YP4 633 aa12.77□□□□□ -0.37
MRPS28-201ENST00000276585 CREBRFQ8IUR6 639 aa12.77□□□□□ -0.37
MRPS28-201ENST00000276585 WDTC1Q8N5D0 677 aa12.77□□□□□ -0.37
MRPS28-201ENST00000276585 C1orf216Q8TAB5 229 aa12.77□□□□□ -0.37
MRPS28-201ENST00000276585 TUBGCP2Q9BSJ2 902 aa12.77□□□□□ -0.37
MRPS28-201ENST00000276585 SLC4A5Q9BY07 1137 aa12.77□□□□□ -0.37
MRPS28-201ENST00000276585 DCLK3Q9C098 648 aa12.77□□□□□ -0.37
MRPS28-201ENST00000276585 NDST4Q9H3R1 872 aa12.77□□□□□ -0.37
MRPS28-201ENST00000276585 ABCC13Q9NSE7 274 aa12.77□□□□□ -0.37
MRPS28-201ENST00000276585 OLA1Q9NTK5 396 aaKnown RBP12.77□□□□□ -0.37
MRPS28-201ENST00000276585 USP36Q9P275 1121 aaKnown RBP12.77□□□□□ -0.37
MRPS28-201ENST00000276585 WDR35Q9P2L0 1181 aa12.77□□□□□ -0.37
MRPS28-201ENST00000276585 STOML2Q9UJZ1 356 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms