RNA–Protein interactions for RNA: ENST00000270570.8

SLC47A1-201, Transcript of solute carrier family 47 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC47A1, Length 3,280 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-201ENST00000270570 POMPQ9Y244 141 aa13.48□□□□□ -0.25
SLC47A1-201ENST00000270570 COL2A1P02458 1487 aaPredicted RBP13.48□□□□□ -0.25
SLC47A1-201ENST00000270570 SCN1AP35498 2009 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 C9JVG2 144 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 GLRA3O75311 464 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 BEST1O76090 585 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 ROR2Q01974 943 aaKnown RBP13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 SEPT6Q14141 434 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 NET1Q7Z628 596 aaPredicted RBP13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 TRIM74Q86UV6 250 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 TRIM73Q86UV7 250 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 PIGZQ86VD9 579 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 ZNF567Q8N184 647 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 TDRD5Q8NAT2 981 aaKnown RBP13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 MCUQ8NE86 351 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 KHSRPQ92945 711 aaKnown RBP eCLIP13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 RNF39Q9H2S5 420 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 S100A14Q9HCY8 104 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 COPG2Q9UBF2 871 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 FAM159BA6NKW6 160 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 USP2O75604 605 aaPredicted RBP13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 SERPINE1P05121 402 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 CTBP1Q13363 440 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 TTLL4Q14679 1199 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 PCDH20Q8N6Y1 951 aaKnown RBP13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 OCEL1Q9H607 264 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 GTSE1Q9NYZ3 720 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 NEMP2A6NFY4 417 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 C22orf31O95567 290 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 POLBP06746 335 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 HDCP19113 662 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 ABCE1P61221 599 aaKnown RBP13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 CACNB2Q08289 660 aaPredicted RBP13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 TBC1D25Q3MII6 688 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 ARHGAP22Q7Z5H3 698 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 ZBTB46Q86UZ6 589 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 SIX6OS1Q8N1H7 587 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 RNF139Q8WU17 664 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 FRMD8P1Q9BZ68 369 aaPredicted RBP13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 IL1RL2Q9HB29 575 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 FETUBQ9UGM5 382 aa13.47□□□□□ -0.25
SLC47A1-201ENST00000270570 LOXHD1Q8IVV2 1947 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 A0A0A0MRY4 1105 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 EEF2KO00418 725 aaKnown RBP13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 TRDMT1O14717 391 aaKnown RBP13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 RECQL4O94761 1208 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 JCHAINP01591 159 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 JUNP05412 331 aaKnown RBP13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 MX2P20592 715 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 USP10Q14694 798 aaKnown RBP13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 CNGA3Q16281 694 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 FSTL4Q6MZW2 842 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 ST13P4Q8IZP2 240 aaPredicted RBP13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 CERS2Q96G23 380 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 SPATA13Q96N96 652 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 RHOBTB2Q9BYZ6 727 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 UBE2OQ9C0C9 1292 aaKnown RBP13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 LMCD1Q9NZU5 365 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 ADAMTS5Q9UNA0 930 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 ATP6AP2A0A1C7CYW4 349 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 BCLAF3A2AJT9 711 aaKnown RBP13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 H3BRB1 525 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 DFFAO00273 331 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 LIN7AO14910 233 aaPredicted RBP13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 ATP6AP2O75787 350 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 HNRNPLP14866 589 aaKnown RBP eCLIP13.46□□□□□ -0.252e-8■□□□□ 11.2
SLC47A1-201ENST00000270570 ZNF280AP59817 542 aaPredicted RBP13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 DEUP1Q05D60 604 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 CCNIQ14094 377 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 PCSK7Q16549 785 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 TAZQ16635 292 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 PRAMEF19Q5SWL8 479 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 CYP2R1Q6VVX0 501 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 ICA1LQ8NDH6 482 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 SPATA22Q8NHS9 363 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 HASPINQ8TF76 798 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 RCN3Q96D15 328 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 ZFP42Q96MM3 310 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 GRIP2Q9C0E4 1043 aa13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 TUT1Q9H6E5 874 aaKnown RBP13.46□□□□□ -0.25
SLC47A1-201ENST00000270570 COL11A1P12107 1806 aaPredicted RBP13.46□□□□□ -0.26
SLC47A1-201ENST00000270570 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.45□□□□□ -0.26
SLC47A1-201ENST00000270570 CCL22O00626 93 aa13.45□□□□□ -0.26
SLC47A1-201ENST00000270570 TPST1O60507 370 aa13.45□□□□□ -0.26
SLC47A1-201ENST00000270570 TSPAN1O60635 241 aa13.45□□□□□ -0.26
SLC47A1-201ENST00000270570 MAGEC1O60732 1142 aa13.45□□□□□ -0.26
SLC47A1-201ENST00000270570 SPATA31D3P0C874 917 aa13.45□□□□□ -0.26
SLC47A1-201ENST00000270570 ITGAXP20702 1163 aa13.45□□□□□ -0.26
SLC47A1-201ENST00000270570 PROZP22891 400 aa13.45□□□□□ -0.26
SLC47A1-201ENST00000270570 TKTP29401 623 aaKnown RBP13.45□□□□□ -0.26
SLC47A1-201ENST00000270570 GABRB2P47870 512 aa13.45□□□□□ -0.26
SLC47A1-201ENST00000270570 SERPINB9P50453 376 aa13.45□□□□□ -0.26
SLC47A1-201ENST00000270570 WASHC5Q12768 1159 aa13.45□□□□□ -0.26
SLC47A1-201ENST00000270570 FLOT2Q14254 428 aa13.45□□□□□ -0.26
SLC47A1-201ENST00000270570 ACAP1Q15027 740 aa13.45□□□□□ -0.26
SLC47A1-201ENST00000270570 SLC9A4Q6AI14 798 aa13.45□□□□□ -0.26
SLC47A1-201ENST00000270570 SPATA31D4Q6ZUB0 917 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms