RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 HNRNPCL1O60812 293 aaKnown RBP13.23□□□□□ -0.29
CPSF6-201ENST00000266679 ALDH1A2O94788 518 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 GNAT1P11488 350 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 GM2AP17900 193 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 ERCC2P18074 760 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 ADRA1BP35368 520 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 CLCNKBP51801 687 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 MRPS6P82932 125 aaKnown RBP13.23□□□□□ -0.29
CPSF6-201ENST00000266679 PURAQ00577 322 aaKnown RBP13.23□□□□□ -0.29
CPSF6-201ENST00000266679 OCRLQ01968 901 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 CACNB2Q08289 660 aaPredicted RBP13.23□□□□□ -0.29
CPSF6-201ENST00000266679 RFWD3Q6PCD5 774 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 OR52K1Q8NGK4 314 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 N4BP2L2Q92802 583 aaPredicted RBP13.23□□□□□ -0.29
CPSF6-201ENST00000266679 PCED1BQ96HM7 432 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 APBA2Q99767 749 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 CADM1Q9BY67 442 aaKnown RBP13.23□□□□□ -0.29
CPSF6-201ENST00000266679 RHOBTB2Q9BYZ6 727 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 NMUR2Q9GZQ4 415 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 WDR6Q9NNW5 1121 aaKnown RBP13.23□□□□□ -0.29
CPSF6-201ENST00000266679 DDIT4Q9NX09 232 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 CASTOR2A6NHX0 329 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 M0QZ92 97 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 USP12O75317 370 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 FBXO21O94952 628 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 ALDOAP04075 364 aaKnown RBP13.23□□□□□ -0.29
CPSF6-201ENST00000266679 ERVK-10P10266 1014 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 NCAM1P13591 858 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 PTPN3P26045 913 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 RGS2P41220 211 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 RPL10AP62906 217 aaKnown RBP13.23□□□□□ -0.29
CPSF6-201ENST00000266679 N4BP2L1Q5TBK1 243 aaPredicted RBP13.23□□□□□ -0.29
CPSF6-201ENST00000266679 TLDC1Q6P9B6 456 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 RINLQ6ZS11 566 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 CRLF3Q8IUI8 442 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 C3orf58Q8NDZ4 430 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 ZMIZ2Q8NF64 920 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 PPP1R14CQ8TAE6 165 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 EDEM1Q92611 657 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 C20orf27Q9GZN8 174 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 CRISPLD2Q9H0B8 497 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 TLE6Q9H808 572 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 HMX1Q9NP08 348 aaPredicted RBP13.23□□□□□ -0.29
CPSF6-201ENST00000266679 FAM105AQ9NUU6 356 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 MIOSQ9NXC5 875 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 PPARGC1AQ9UBK2 798 aaKnown RBP13.23□□□□□ -0.29
CPSF6-201ENST00000266679 EMCNQ9ULC0 261 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 ST3GAL5Q9UNP4 418 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 HBS1LQ9Y450 684 aaKnown RBP13.23□□□□□ -0.29
CPSF6-201ENST00000266679 TRPV2Q9Y5S1 764 aa13.23□□□□□ -0.29
CPSF6-201ENST00000266679 E2F8A0AVK6 867 aa13.22□□□□□ -0.29
CPSF6-201ENST00000266679 CCDC22O60826 627 aa13.22□□□□□ -0.29
CPSF6-201ENST00000266679 STX3Q13277 289 aa13.22□□□□□ -0.29
CPSF6-201ENST00000266679 PDE1CQ14123 709 aaPredicted RBP13.22□□□□□ -0.29
CPSF6-201ENST00000266679 FASTKD1Q53R41 847 aaKnown RBP13.22□□□□□ -0.29
CPSF6-201ENST00000266679 NPWQ8N729 165 aa13.22□□□□□ -0.29
CPSF6-201ENST00000266679 GSTCDQ8NEC7 633 aa13.22□□□□□ -0.29
CPSF6-201ENST00000266679 GORASP1Q9BQQ3 440 aa13.22□□□□□ -0.29
CPSF6-201ENST00000266679 BTBD10Q9BSF8 475 aa13.22□□□□□ -0.29
CPSF6-201ENST00000266679 TUBB6Q9BUF5 446 aa13.22□□□□□ -0.29
CPSF6-201ENST00000266679 DENND2DQ9H6A0 471 aaPredicted RBP13.22□□□□□ -0.29
CPSF6-201ENST00000266679 RNPEPL1Q9HAU8 725 aa13.22□□□□□ -0.29
CPSF6-201ENST00000266679 SLC38A7Q9NVC3 462 aa13.22□□□□□ -0.29
CPSF6-201ENST00000266679 KCNK4Q9NYG8 393 aa13.22□□□□□ -0.29
CPSF6-201ENST00000266679 IGSF9Q9P2J2 1179 aa13.22□□□□□ -0.29
CPSF6-201ENST00000266679 COLQQ9Y215 455 aaPredicted RBP13.22□□□□□ -0.29
CPSF6-201ENST00000266679 H0Y3Z8 333 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 BIRC5O15392 142 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 GYG2O15488 501 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 GLRA3O75311 464 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 SNNO75324 88 aaPredicted RBP13.21□□□□□ -0.29
CPSF6-201ENST00000266679 LTFP02788 710 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 THP07101 528 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 ITGA2BP08514 1039 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 F7P08709 466 aaPredicted RBP13.21□□□□□ -0.29
CPSF6-201ENST00000266679 C6orf222P0C671 652 aaPredicted RBP13.21□□□□□ -0.29
CPSF6-201ENST00000266679 ESRRAP11474 423 aaPredicted RBP13.21□□□□□ -0.29
CPSF6-201ENST00000266679 HOXC8P31273 242 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 ELF1P32519 619 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 GMPRP36959 345 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 CPA2P48052 419 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 LHX1P48742 406 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 SCNN1GP51170 649 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 AQP5P55064 265 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 KRT72Q14CN4 511 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 HSF5Q4G112 596 aaPredicted RBP13.21□□□□□ -0.29
CPSF6-201ENST00000266679 WASHC2DQ5SRD0 308 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 MAP3K21Q5TCX8 1036 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 CYS1Q717R9 158 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.21□□□□□ -0.29
CPSF6-201ENST00000266679 NTAN1Q96AB6 310 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 ZNF669Q96BR6 464 aaPredicted RBP13.21□□□□□ -0.29
CPSF6-201ENST00000266679 NUDCD1Q96RS6 583 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 PAAF1Q9BRP4 392 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 ZFATQ9P243 1243 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 MAGED2Q9UNF1 606 aaPredicted RBP13.21□□□□□ -0.29
CPSF6-201ENST00000266679 RPS6KL1Q9Y6S9 549 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 ENTPD5O75356 428 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 LYPLA1O75608 230 aaPredicted RBP13.21□□□□□ -0.29
CPSF6-201ENST00000266679 CALB2P22676 271 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms