RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SLC2A13Q96QE2 648 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 PAFAH2Q99487 392 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 ZYG11BQ9C0D3 744 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 LRRC4CQ9HCJ2 640 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 CALCOCO1Q9P1Z2 691 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 TET1Q8NFU7 2136 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 KCNU1A8MYU2 1149 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 E9PAM4 449 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 COPEO14579 308 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 FGF10O15520 208 aaPredicted RBP9.55□□□□□ -0.88
SSR3-201ENST00000265044 CCNB1P14635 433 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 NFKB1P19838 968 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 CXCR3P49682 368 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 USP46P62068 366 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 ZBTB16Q05516 673 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 PPIGQ13427 754 aaKnown RBP eCLIP9.55□□□□□ -0.88
SSR3-201ENST00000265044 CDH18Q13634 790 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 PKN2Q16513 984 aaKnown RBP9.55□□□□□ -0.88
SSR3-201ENST00000265044 LRRC26Q2I0M4 334 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 PARP6Q2NL67 630 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 ACCSLQ4AC99 568 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 FNBP1LQ5T0N5 605 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 MROH9Q5TGP6 573 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 SLC9A4Q6AI14 798 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 TIGD7Q6NT04 549 aaPredicted RBP9.55□□□□□ -0.88
SSR3-201ENST00000265044 CARNMT1Q8N4J0 409 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 SLC43A3Q8NBI5 491 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 PDZD8Q8NEN9 1154 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 ZNF461Q8TAF7 563 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 DDI1Q8WTU0 396 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 THOC1Q96FV9 657 aaKnown RBP9.55□□□□□ -0.88
SSR3-201ENST00000265044 CDK5RAP1Q96SZ6 601 aaKnown RBP9.55□□□□□ -0.88
SSR3-201ENST00000265044 PRMT1Q99873 361 aaKnown RBP9.55□□□□□ -0.88
SSR3-201ENST00000265044 CORO1BQ9BR76 489 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 UBXN6Q9BZV1 441 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 ALG13Q9NP73 1137 aaKnown RBP9.55□□□□□ -0.88
SSR3-201ENST00000265044 SMYD2Q9NRG4 433 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 WDR27A2RRH5 827 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 ANXA9O76027 345 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 TMEM63AO94886 807 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 NUDT17P0C025 328 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 HSPA1AP0DMV8 641 aaKnown RBP9.55□□□□□ -0.88
SSR3-201ENST00000265044 HSPA1BP0DMV9 641 aaKnown RBP9.55□□□□□ -0.88
SSR3-201ENST00000265044 GABRR2P28476 465 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 AVPR1AP37288 418 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 SMAD3P84022 425 aaKnown RBP9.55□□□□□ -0.88
SSR3-201ENST00000265044 ARCQ7LC44 396 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 CIR1Q86X95 450 aaPredicted RBP9.55□□□□□ -0.88
SSR3-201ENST00000265044 OR52K1Q8NGK4 314 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 BTN2A3PQ96KV6 586 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 ALOX15BO15296 676 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 SPAG6O75602 509 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 METTL18O95568 372 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 ADH1AP07327 375 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 RHOCP08134 193 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 KRT4P19013 534 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 MAXP61244 160 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 FPGSQ05932 587 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 SLC10A2Q12908 348 aaPredicted RBP9.55□□□□□ -0.88
SSR3-201ENST00000265044 AUHQ13825 339 aaKnown RBP9.55□□□□□ -0.88
SSR3-201ENST00000265044 RBM23Q86U06 439 aaKnown RBP9.55□□□□□ -0.88
SSR3-201ENST00000265044 RASSF3Q86WH2 238 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 SREK1Q8WXA9 508 aaKnown RBP9.55□□□□□ -0.88
SSR3-201ENST00000265044 SEC14L1Q92503 715 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 EMILIN2Q9BXX0 1053 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 VPS11Q9H270 941 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 GKN1Q9NS71 199 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 UXTQ9UBK9 157 aaPredicted RBP9.55□□□□□ -0.88
SSR3-201ENST00000265044 AFF4Q9UHB7 1163 aaKnown RBP9.55□□□□□ -0.88
SSR3-201ENST00000265044 SCML2Q9UQR0 700 aa9.55□□□□□ -0.88
SSR3-201ENST00000265044 AAR2Q9Y312 384 aaKnown RBP9.55□□□□□ -0.88
SSR3-201ENST00000265044 TMEM189-UBE2V1I3L0A0 370 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 ZNF189O75820 626 aaPredicted RBP9.54□□□□□ -0.88
SSR3-201ENST00000265044 TIMP1P01033 207 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 LSP1P33241 339 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 GJA8P48165 433 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 RENBPP51606 427 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 POU6F1Q14863 301 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 KBTBD12Q3ZCT8 623 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 PABPC1LQ4VXU2 614 aaKnown RBP9.54□□□□□ -0.88
SSR3-201ENST00000265044 PPM1LQ5SGD2 360 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 DNAH12Q6ZR08 3092 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 CCDC121Q6ZUS5 278 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 ANKRD33Q7Z3H0 272 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 CACNA2D3Q8IZS8 1091 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 MAB21L3Q8N8X9 362 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 CENPIQ92674 756 aaPredicted RBP9.54□□□□□ -0.88
SSR3-201ENST00000265044 KLHL5Q96PQ7 755 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 QKIQ96PU8 341 aaKnown RBP eCLIP9.54□□□□□ -0.88
SSR3-201ENST00000265044 BRD8Q9H0E9 1235 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 PRDM16Q9HAZ2 1276 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 CSNK1G1Q9HCP0 422 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 C20orf96Q9NUD7 363 aaPredicted RBP9.54□□□□□ -0.88
SSR3-201ENST00000265044 TRHDEQ9UKU6 1024 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 E2F8A0AVK6 867 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 GMNCA6NCL1 334 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 FOXO6A8MYZ6 492 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 EIF3HO15372 352 aaKnown RBP eCLIP9.54□□□□□ -0.88
SSR3-201ENST00000265044 ZBTB24O43167 697 aaPredicted RBP9.54□□□□□ -0.88
SSR3-201ENST00000265044 IGHA2P01877 340 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms