RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 PHACTR1Q9C0D0 580 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 EHD4Q9H223 541 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 MAP2P11137 1827 aaKnown RBP18.34■□□□□ 0.53
COL5A3-201ENST00000264828 SYNCRIPO60506 623 aaKnown RBP18.34■□□□□ 0.53
COL5A3-201ENST00000264828 LBPP18428 481 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 ME2P23368 584 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 FMO4P31512 558 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 TRPM5Q9NZQ8 1165 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 MAGEB16A2A368 324 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 RAD51BO15315 384 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 TNNI3P19429 210 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 ARMC3Q5W041 872 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 PCDH20Q8N6Y1 951 aaKnown RBP18.34■□□□□ 0.53
COL5A3-201ENST00000264828 STK32AQ8WU08 396 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 OSBPL6Q9BZF3 934 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 EFCAB10A6NFE3 127 aa18.33■□□□□ 0.53
COL5A3-201ENST00000264828 GTF2E2P29084 291 aaKnown RBP18.33■□□□□ 0.53
COL5A3-201ENST00000264828 MAPK9P45984 424 aa18.33■□□□□ 0.53
COL5A3-201ENST00000264828 ZCCHC8Q6NZY4 707 aaKnown RBP18.33■□□□□ 0.53
COL5A3-201ENST00000264828 MILR1Q7Z6M3 343 aa18.33■□□□□ 0.53
COL5A3-201ENST00000264828 ZNF605Q86T29 641 aa18.33■□□□□ 0.53
COL5A3-201ENST00000264828 GDF3Q9NR23 364 aa18.33■□□□□ 0.53
COL5A3-201ENST00000264828 LRRC4BQ9NT99 713 aa18.33■□□□□ 0.53
COL5A3-201ENST00000264828 KLHL28Q9NXS3 571 aa18.33■□□□□ 0.53
COL5A3-201ENST00000264828 SPATA31D1Q6ZQQ2 1576 aa18.33■□□□□ 0.53
COL5A3-201ENST00000264828 CNPP09543 421 aaKnown RBP18.33■□□□□ 0.53
COL5A3-201ENST00000264828 MYL12AP19105 171 aa18.33■□□□□ 0.53
COL5A3-201ENST00000264828 ABCG1P45844 678 aa18.33■□□□□ 0.53
COL5A3-201ENST00000264828 LHX1P48742 406 aa18.33■□□□□ 0.53
COL5A3-201ENST00000264828 TSEN2Q8NCE0 465 aaKnown RBP18.33■□□□□ 0.53
COL5A3-201ENST00000264828 APBB2Q92870 758 aa18.33■□□□□ 0.53
COL5A3-201ENST00000264828 WDR41Q9HAD4 459 aa18.33■□□□□ 0.53
COL5A3-201ENST00000264828 TPRKBQ9Y3C4 175 aa18.33■□□□□ 0.53
COL5A3-201ENST00000264828 FAM47E-STBD1D6RA91 191 aa18.33■□□□□ 0.52
COL5A3-201ENST00000264828 BTN3A1O00481 513 aa18.33■□□□□ 0.52
COL5A3-201ENST00000264828 ADRA1DP25100 572 aa18.33■□□□□ 0.52
COL5A3-201ENST00000264828 CRABP2P29373 138 aa18.33■□□□□ 0.52
COL5A3-201ENST00000264828 MAD2L1Q13257 205 aaPredicted RBP18.33■□□□□ 0.52
COL5A3-201ENST00000264828 ITGADQ13349 1161 aa18.33■□□□□ 0.52
COL5A3-201ENST00000264828 RNF180Q86T96 592 aa18.33■□□□□ 0.52
COL5A3-201ENST00000264828 UGT2B28Q9BY64 529 aa18.33■□□□□ 0.52
COL5A3-201ENST00000264828 PRKAG3Q9UGI9 489 aa18.33■□□□□ 0.52
COL5A3-201ENST00000264828 RABGEF1Q9UJ41 708 aa18.33■□□□□ 0.52
COL5A3-201ENST00000264828 ELF3P78545 371 aaPredicted RBP18.33■□□□□ 0.52
COL5A3-201ENST00000264828 C1QBPQ07021 282 aaKnown RBP18.33■□□□□ 0.52
COL5A3-201ENST00000264828 TMEM132CQ8N3T6 1108 aa18.33■□□□□ 0.52
COL5A3-201ENST00000264828 OSMRQ99650 979 aa18.33■□□□□ 0.52
COL5A3-201ENST00000264828 RTFDC1Q9BY42 306 aaPredicted RBP18.33■□□□□ 0.52
COL5A3-201ENST00000264828 CDHR5Q9HBB8 845 aa18.33■□□□□ 0.52
COL5A3-201ENST00000264828 ADPRHL2Q9NX46 363 aa18.33■□□□□ 0.52
COL5A3-201ENST00000264828 MKL2Q9ULH7 1088 aa18.33■□□□□ 0.52
COL5A3-201ENST00000264828 TNS2Q63HR2 1409 aa18.33■□□□□ 0.52
COL5A3-201ENST00000264828 TPP1O14773 563 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 PSMG1O95456 288 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 AKAP5P24588 427 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 DNAJB2P25686 324 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 MFSD7Q6UXD7 560 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 UTS2BQ765I0 119 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 GLT6D1Q7Z4J2 308 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 DHRSXQ8N5I4 330 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 AENQ8WTP8 325 aaKnown RBP18.32■□□□□ 0.52
COL5A3-201ENST00000264828 POLR1BQ9H9Y6 1135 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 GAKO14976 1311 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 PCDH8O95206 1070 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 PAICSP22234 425 aaKnown RBP18.32■□□□□ 0.52
COL5A3-201ENST00000264828 METTL6Q8TCB7 284 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 ANKRD6Q9Y2G4 727 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 POMCP01189 267 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 IL6P05231 212 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 ZSCAN5DPP0CG00 497 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 PABPC1P11940 636 aaKnown RBP18.32■□□□□ 0.52
COL5A3-201ENST00000264828 ZNF544Q6NX49 715 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 ZNF621Q6ZSS3 439 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 C16orf62Q7Z3J2 963 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 SCUBE3Q8IX30 993 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 OR56A4Q8NGH8 313 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 LOC100506127A0A0U1RQW1 187 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 IFRD1O00458 451 aaPredicted RBP18.32■□□□□ 0.52
COL5A3-201ENST00000264828 ZDHHC15Q96MV8 337 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 C9orf16Q9BUW7 83 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 NMRAL1Q9HBL8 299 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 PXDNQ92626 1479 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 CKBP12277 381 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 LRPAP1P30533 357 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 XRCC4Q13426 336 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 FBXO30Q8TB52 745 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 ZNF112Q9UJU3 913 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 CRYL1Q9Y2S2 319 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 TMEM131LA2VDJ0 1609 aa18.32■□□□□ 0.52
COL5A3-201ENST00000264828 DEPDC5O75140 1603 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 RNASEH1O60930 286 aaKnown RBP18.31■□□□□ 0.52
COL5A3-201ENST00000264828 TUBP50607 506 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 RD3Q7Z3Z2 195 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 INVSQ9Y283 1065 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 PCDHA3Q9Y5H8 950 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 USP12O75317 370 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 TTMPQ5BVD1 217 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 SPANXN2Q5MJ10 180 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 IL27RAQ6UWB1 636 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 RBM43Q6ZSC3 357 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms