RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 AFAP1L2Q8N4X5 818 aa16.68■□□□□ 0.26
CTCF-201ENST00000264010 Q9Y3F1 56 aa16.68■□□□□ 0.26
CTCF-201ENST00000264010 GP5P40197 560 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 INHBEP58166 350 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 CRADDP78560 199 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 SPANXN3Q5MJ09 141 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 ZNF618Q5T7W0 954 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 OVOS1Q6IE37 1185 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 RGS9BPQ6ZS82 235 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 LINC00523Q86TU6 105 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.67■□□□□ 0.26
CTCF-201ENST00000264010 STKLD1Q8NE28 680 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 INPP5DQ92835 1189 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 C12orf65Q9H3J6 166 aaKnown RBP16.67■□□□□ 0.26
CTCF-201ENST00000264010 SMYD2Q9NRG4 433 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 IPO11Q9UI26 975 aaKnown RBP16.67■□□□□ 0.26
CTCF-201ENST00000264010 EVPLQ92817 2033 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 TYROBPO43914 113 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 DUSP11O75319 330 aaKnown RBP16.67■□□□□ 0.26
CTCF-201ENST00000264010 ENDOD1O94919 500 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 PGK1P00558 417 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 CACNA2D1P54289 1103 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 ARPP19P56211 112 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 C16orf87Q6PH81 154 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 HASPINQ8TF76 798 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 MBLAC1A4D2B0 266 aaPredicted RBP16.67■□□□□ 0.26
CTCF-201ENST00000264010 ZBBXA8MT70 800 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 PDE5AO76074 875 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 BDNFP23560 247 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 NDUFV1P49821 464 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 KPNA2P52292 529 aaKnown RBP16.67■□□□□ 0.26
CTCF-201ENST00000264010 IGDCC3Q8IVU1 814 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 NETO2Q8NC67 525 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 DENND1AQ8TEH3 1009 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 SERAC1Q96JX3 654 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 TKTL2Q9H0I9 626 aa16.67■□□□□ 0.26
CTCF-201ENST00000264010 LSM1O15116 133 aaKnown RBP16.66■□□□□ 0.26
CTCF-201ENST00000264010 CBX6O95503 412 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 NCF2P19878 526 aaPredicted RBP16.66■□□□□ 0.26
CTCF-201ENST00000264010 CPA2P48052 419 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 SEMA5AQ13591 1074 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 ZBTB6Q15916 424 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 TAF12Q16514 161 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 LRRC8BQ6P9F7 803 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 KYAT3Q6YP21 454 aaKnown RBP16.66■□□□□ 0.26
CTCF-201ENST00000264010 ARCQ7LC44 396 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 OSTM1Q86WC4 334 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 DCP1BQ8IZD4 617 aaKnown RBP16.66■□□□□ 0.26
CTCF-201ENST00000264010 TMEM237Q96Q45 408 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 VAT1Q99536 393 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 NSMCE4AQ9NXX6 385 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 RAD54BQ9Y620 910 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 SPTLC1O15269 473 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 HNRNPRO43390 633 aaKnown RBP16.66■□□□□ 0.26
CTCF-201ENST00000264010 ENO1P06733 434 aaKnown RBP16.66■□□□□ 0.26
CTCF-201ENST00000264010 TFE3P19532 575 aaPredicted RBP16.66■□□□□ 0.26
CTCF-201ENST00000264010 CYTH1Q15438 398 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 FAM228AQ86W67 206 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 SIX5Q8N196 739 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 PPP1R2P1Q96PQ5 205 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 PNPLA8Q9NP80 782 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 ERI2A8K979 691 aaKnown RBP16.66■□□□□ 0.26
CTCF-201ENST00000264010 ALDH18A1P54886 795 aaKnown RBP16.66■□□□□ 0.26
CTCF-201ENST00000264010 UGP2Q16851 508 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 NCBP2-AS2Q69YL0 99 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 PRPF39Q86UA1 669 aaKnown RBP16.66■□□□□ 0.26
CTCF-201ENST00000264010 CHSY1Q86X52 802 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 ERLEC1Q96DZ1 483 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 SLC9A7Q96T83 725 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 APOL2Q9BQE5 337 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 OR12D3Q9UGF7 316 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 TRIM33Q9UPN9 1127 aa16.66■□□□□ 0.26
CTCF-201ENST00000264010 MAGEB16A2A368 324 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 PGM1P36871 562 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 RCN1Q15293 331 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 TMEM259Q4ZIN3 620 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 FAM182AQ5T1J6 154 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 N4BP2L1Q5TBK1 243 aaPredicted RBP16.65■□□□□ 0.26
CTCF-201ENST00000264010 C1orf146Q5VVC0 180 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 TRNP1Q6NT89 227 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 STRA8Q7Z7C7 330 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 ACMSDQ8TDX5 336 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 PLLPQ9Y342 182 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 ANXA9O76027 345 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 SERPINB8P50452 374 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 IRF5Q13568 498 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 FASTKD1Q53R41 847 aaKnown RBP16.65■□□□□ 0.26
CTCF-201ENST00000264010 GRTP1Q5TC63 336 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 CES3Q6UWW8 571 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 PPHLN1Q8NEY8 458 aaKnown RBP16.65■□□□□ 0.26
CTCF-201ENST00000264010 KBTBD7Q8WVZ9 684 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 KCTD13Q8WZ19 329 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 MYLPFQ96A32 169 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 CELF6Q96J87 481 aaKnown RBP16.65■□□□□ 0.26
CTCF-201ENST00000264010 XPNPEP3Q9NQH7 507 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 TIMM44O43615 452 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 CALB2P22676 271 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 NPY2RP49146 381 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 AQP5P55064 265 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 CLEC20AQ6ZU45 233 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms