RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 TMEM51Q9NW97 253 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 PLK2Q9NYY3 685 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 DTLQ9NZJ0 730 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 LSM7Q9UK45 103 aaKnown RBP10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 USP15Q9Y4E8 981 aaPredicted RBP10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 WNT6Q9Y6F9 365 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 XIRP2A4UGR9 3374 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 DENND4AQ7Z401 1863 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 E2F8A0AVK6 867 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 LIASO43766 372 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 TBL1XO60907 577 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 PHF2O75151 1096 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 RHOXF2BP0C7M4 288 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 FCARP24071 287 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 COILP38432 576 aaPredicted RBP10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 EIF3EP60228 445 aaKnown RBP10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 SLC7A5Q01650 507 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 USP4Q13107 963 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 PAFAH1B3Q15102 231 aaKnown RBP10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 CYP1B1Q16678 543 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 TRIM68Q6AZZ1 485 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 CCDC137Q6PK04 289 aaKnown RBP10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 TMCO3Q6UWJ1 677 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 ARHGAP36Q6ZRI8 547 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 CELF5Q8N6W0 485 aaKnown RBP10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 OR52K2Q8NGK3 314 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 DEPDC1BQ8WUY9 529 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 MAIP1Q8WWC4 291 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 SMARCD2Q92925 531 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 ZFYVE19Q96K21 471 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 RIPOR3Q96MK2 946 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 RHOXF2Q9BQY4 288 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 PLA2G2FQ9BZM2 168 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 SLC39A8Q9C0K1 460 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 NOL6Q9H6R4 1146 aaKnown RBP10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 PPARGC1AQ9UBK2 798 aaKnown RBP10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 ZNF212Q9UDV6 495 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 AMACRQ9UHK6 382 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 CD207Q9UJ71 328 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 STOML2Q9UJZ1 356 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 CDH7Q9ULB5 785 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 CLEC4EQ9ULY5 219 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 NYNRINQ9P2P1 1898 aaKnown RBP10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 GOLGA6L10A0A0M3HER8 536 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 SOBPA7XYQ1 873 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 HEPACAM2A8MVW5 462 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 H7C0C1 242 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 CCDC188H7C350 402 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 GFRA2O00451 464 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 RAD51CO43502 376 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 CHRM1P11229 460 aaPredicted RBP10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 ETS1P14921 441 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 ZFXP17010 805 aaPredicted RBP10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 RHOQP17081 205 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 TGM2P21980 687 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 MTHFRP42898 656 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 PTGIRP43119 386 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 ATP5OP48047 213 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 BYSLQ13895 437 aaKnown RBP10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 NOMO1Q15155 1222 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 TRIP13Q15645 432 aaPredicted RBP10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 CCNG2Q16589 344 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 C5orf22Q49AR2 442 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 PARM1Q6UWI2 310 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 TMEM25Q86YD3 366 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 ARHGAP12Q8IWW6 846 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 CCDC105Q8IYK2 499 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 MMGT1Q8N4V1 131 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 RTL3Q8N8U3 475 aaKnown RBP10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 C12orf50Q8NA57 414 aaPredicted RBP10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 TDRD5Q8NAT2 981 aaKnown RBP10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 GLIS1Q8NBF1 620 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 SLC35B2Q8TB61 432 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 WFDC5Q8TCV5 224 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 TMA16Q96EY4 203 aaKnown RBP10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 ASIC4Q96FT7 647 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 LGMNQ99538 433 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 KXD1Q9BQD3 176 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 TMEM121Q9BTD3 319 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 RPP25Q9BUL9 199 aaKnown RBP10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 LRRC19Q9H756 370 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 CATSPERBQ9H7T0 1116 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 UBE2ZQ9H832 354 aaPredicted RBP10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 TMEM248Q9NWD8 314 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 GDE1Q9NZC3 331 aa10.01□□□□□ -0.81
SNRNP40-201ENST00000263694 MYO18AQ92614 2054 aaKnown RBP10□□□□□ -0.81
SNRNP40-201ENST00000263694 DFFAO00273 331 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 FGF10O15520 208 aaPredicted RBP10□□□□□ -0.81
SNRNP40-201ENST00000263694 TTI1O43156 1089 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 LATS1O95835 1130 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 RBP3P10745 1247 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 LAMP2P13473 410 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 OR1E1P30953 314 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 ZNF135P52742 658 aaPredicted RBP10□□□□□ -0.81
SNRNP40-201ENST00000263694 GDF10P55107 478 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 GRM2Q14416 872 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 OASLQ15646 514 aaKnown RBP10□□□□□ -0.81
SNRNP40-201ENST00000263694 ERCC6LQ2NKX8 1250 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 FSCBQ5H9T9 825 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 RABGAP1LQ5R372 815 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms