RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 ABCE1P61221 599 aaKnown RBP9.35□□□□□ -0.91
MSH4-201ENST00000263187 GK3PQ14409 553 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 LBRQ14739 615 aaKnown RBP9.35□□□□□ -0.91
MSH4-201ENST00000263187 PAOXQ6QHF9 649 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 RPS27LQ71UM5 84 aaKnown RBP9.35□□□□□ -0.91
MSH4-201ENST00000263187 PIGZQ86VD9 579 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 GALNT4Q8N4A0 578 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 RNF169Q8NCN4 708 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 EDEM1Q92611 657 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 RTP4Q96DX8 246 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 SCYL1Q96KG9 808 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 ANKRD27Q96NW4 1050 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 LENG8Q96PV6 779 aaPredicted RBP9.35□□□□□ -0.91
MSH4-201ENST00000263187 IARS2Q9NSE4 1012 aaKnown RBP9.35□□□□□ -0.91
MSH4-201ENST00000263187 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.35□□□□□ -0.91
MSH4-201ENST00000263187 SSC5DA1L4H1 1573 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 CCDC160A6NGH7 325 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 H3BRB1 525 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 SERPINE1P05121 402 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 ITGAXP20702 1163 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 MAGEA3P43357 314 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 ITGA7Q13683 1181 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 DPYSL2Q16555 572 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 FSTL4Q6MZW2 842 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 MCUQ8NE86 351 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 SLC7A14Q8TBB6 771 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 RNF139Q8WU17 664 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 MED10Q9BTT4 135 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 SNX25Q9H3E2 840 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 ATXN3LQ9H3M9 355 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 TUT1Q9H6E5 874 aaKnown RBP9.35□□□□□ -0.91
MSH4-201ENST00000263187 ANLNQ9NQW6 1124 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 GPRC5DQ9NZD1 345 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 RPL26L1Q9UNX3 145 aaKnown RBP9.35□□□□□ -0.91
MSH4-201ENST00000263187 POMPQ9Y244 141 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 WDR90Q96KV7 1748 aa9.35□□□□□ -0.91
MSH4-201ENST00000263187 A0A096LPK6 155 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 TMEM233B4DJY2 109 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 MDM4O15151 490 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 GLRA3O75311 464 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 RECQL4O94761 1208 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 JUNP05412 331 aaKnown RBP9.34□□□□□ -0.91
MSH4-201ENST00000263187 ENO3P13929 434 aaPredicted RBP9.34□□□□□ -0.91
MSH4-201ENST00000263187 ATP6V1B1P15313 513 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 NELFEP18615 380 aaKnown RBP9.34□□□□□ -0.91
MSH4-201ENST00000263187 GSTT1P30711 240 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 SERPINB9P50453 376 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 MAP3K7CLP57077 242 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 MRPS22P82650 360 aaKnown RBP9.34□□□□□ -0.91
MSH4-201ENST00000263187 SATB1Q01826 763 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 SEMA5AQ13591 1074 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 PDCD2Q16342 344 aaPredicted RBP9.34□□□□□ -0.91
MSH4-201ENST00000263187 MMEL1Q495T6 779 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 AP1ARQ63HQ0 302 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 MTHFD1LQ6UB35 978 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 SDCCAG8Q86SQ7 713 aaPredicted RBP9.34□□□□□ -0.91
MSH4-201ENST00000263187 DHDDSQ86SQ9 333 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 CCNYL1Q8N7R7 359 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 OR6Y1Q8NGX8 325 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 ZSCAN18Q8TBC5 510 aaPredicted RBP9.34□□□□□ -0.91
MSH4-201ENST00000263187 NMD3Q96D46 503 aaKnown RBP9.34□□□□□ -0.91
MSH4-201ENST00000263187 CATSPER2Q96P56 530 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 RHOBTB2Q9BYZ6 727 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 C20orf96Q9NUD7 363 aaPredicted RBP9.34□□□□□ -0.91
MSH4-201ENST00000263187 ASB3Q9Y575 518 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 FZD9O00144 591 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 GAS2O43903 313 aaKnown RBP9.34□□□□□ -0.91
MSH4-201ENST00000263187 ARHGAP1Q07960 439 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 PKDCCQ504Y2 493 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 ZNF280DQ6N043 979 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 KYAT3Q6YP21 454 aaKnown RBP9.34□□□□□ -0.91
MSH4-201ENST00000263187 SATL1Q86VE3 508 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 SNX32Q86XE0 403 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 RNF135Q8IUD6 432 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 CERS2Q96G23 380 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 TASP1Q9H6P5 420 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 ZNF408Q9H9D4 720 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 PIGVQ9NUD9 493 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 CLIC5Q9NZA1 410 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 BIRC5O15392 142 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 ZBTB24O43167 697 aaPredicted RBP9.34□□□□□ -0.91
MSH4-201ENST00000263187 BUD23O43709 281 aaKnown RBP9.34□□□□□ -0.91
MSH4-201ENST00000263187 POLBP06746 335 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 FESP07332 822 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 SPATA31D3P0C874 917 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 SRGAP2BP0DMP2 458 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 AOC1P19801 751 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 BTKQ06187 659 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 NIPAL4Q0D2K0 466 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 MSLNQ13421 630 aaPredicted RBP9.34□□□□□ -0.91
MSH4-201ENST00000263187 PRAMEF19Q5SWL8 479 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 SPATA31D4Q6ZUB0 917 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 TDRD5Q8NAT2 981 aaKnown RBP9.34□□□□□ -0.91
MSH4-201ENST00000263187 PIP4K2CQ8TBX8 421 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 LRRC39Q96DD0 335 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 KCNK16Q96T55 309 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 APBA2Q99767 749 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 APPL1Q9UKG1 709 aa9.34□□□□□ -0.91
MSH4-201ENST00000263187 PIN4Q9Y237 131 aaKnown RBP9.34□□□□□ -0.91
MSH4-201ENST00000263187 SSX2IPQ9Y2D8 614 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms