RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 KCNN1Q92952 543 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 RTP4Q96DX8 246 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 TBCBQ99426 244 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 MTMR10Q9NXD2 777 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 TUBGCP4Q9UGJ1 667 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 CPA4Q9UI42 421 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 SCN1AP35498 2009 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 MFSD11O43934 449 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 PLIN3O60664 434 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 DGKIO75912 1065 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 LMO2P25791 158 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 IDH3AP50213 366 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 WASHC5Q12768 1159 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 IRF5Q13568 498 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 TTLL4Q14679 1199 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 MYBPC3Q14896 1274 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 DNAL1Q4LDG9 190 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 EFHC1Q5JVL4 640 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 PDPK2PQ6A1A2 396 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 FRMD7Q6ZUT3 714 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 DPP9Q86TI2 863 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 HTR3CQ8WXA8 447 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 IFT43Q96FT9 208 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 ZMAT2Q96NC0 199 aaKnown RBP10.31□□□□□ -0.76
LIG3-201ENST00000262327 AGAP2Q99490 1192 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 SORT1Q99523 831 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 MOCS1Q9NZB8 636 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 MCM3APO60318 1980 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 ALDH1A1P00352 501 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 PRKCGP05129 697 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 ITGA2BP08514 1039 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 MAGEA3P43357 314 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 COPAP53621 1224 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 RBP5P82980 135 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 IRF9Q00978 393 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 CCNIQ14094 377 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 MORN1Q5T089 497 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 NCBP2-AS2Q69YL0 99 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 S100A14Q9HCY8 104 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 SNTG2Q9NY99 539 aa10.31□□□□□ -0.76
LIG3-201ENST00000262327 F8W8V4 182 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 RNF103O00237 685 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 BUD23O43709 281 aaKnown RBP10.3□□□□□ -0.76
LIG3-201ENST00000262327 C22orf31O95567 290 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 IL1BP01584 269 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 SERPINB5P36952 375 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 DLG1Q12959 904 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 TRIP10Q15642 601 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 RABGAP1LQ5R372 815 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 NAPRTQ6XQN6 538 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 ZNF781Q8N8C0 355 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 ACVR1CQ8NER5 493 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 ARNTL2Q8WYA1 636 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 ZNF670Q9BS34 389 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 CYP3A43Q9HB55 503 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 PRMT7Q9NVM4 692 aaPredicted RBP10.3□□□□□ -0.76
LIG3-201ENST00000262327 TXNDC16Q9P2K2 825 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 AK5Q9Y6K8 562 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 SIP14410 1827 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 CA12O43570 354 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 ZBTB14O43829 449 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 GCATO75600 419 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 RALBP11234 206 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 NME3Q13232 169 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 KIZQ2M2Z5 673 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 GRAMD1BQ3KR37 738 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 SLC9B1Q4ZJI4 515 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 CTU1Q7Z7A3 348 aaKnown RBP10.3□□□□□ -0.76
LIG3-201ENST00000262327 SDCCAG8Q86SQ7 713 aaPredicted RBP10.3□□□□□ -0.76
LIG3-201ENST00000262327 MCUQ8NE86 351 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 OR52K1Q8NGK4 314 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 MAPK15Q8TD08 544 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 PPP4R1Q8TF05 950 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 GDPD5Q8WTR4 605 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 SLC35F5Q8WV83 523 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 TFB1MQ8WVM0 346 aaKnown RBP10.3□□□□□ -0.76
LIG3-201ENST00000262327 MAML3Q96JK9 1138 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 MARK4Q96L34 752 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 FCRL3Q96P31 734 aaPredicted RBP10.3□□□□□ -0.76
LIG3-201ENST00000262327 WDR55Q9H6Y2 383 aaPredicted RBP10.3□□□□□ -0.76
LIG3-201ENST00000262327 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.3□□□□□ -0.76
LIG3-201ENST00000262327 UBP1Q9NZI7 540 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 KLK14Q9P0G3 267 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 ANK1P16157 1881 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 AIM2O14862 343 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 ATP9BO43861 1147 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 AMHP03971 560 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 RAG1P15918 1043 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 TPH1P17752 444 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 PAX3P23760 479 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 AKAP5P24588 427 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 MAP2K5Q13163 448 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 PPM1LQ5SGD2 360 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 FAM91A1Q658Y4 838 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 DHDDSQ86SQ9 333 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 OR6Y1Q8NGX8 325 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 P2RY11Q96G91 374 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 TSPAN18Q96SJ8 248 aa10.3□□□□□ -0.76
LIG3-201ENST00000262327 FAM49AQ9H0Q0 323 aaPredicted RBP10.3□□□□□ -0.76
LIG3-201ENST00000262327 SMARCAD1Q9H4L7 1026 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms