RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 R3HDM2Q9Y2K5 976 aaKnown RBP28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 ERCC2P18074 760 aa28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 CCDC181Q5TID7 509 aa28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 TPGS1Q6ZTW0 290 aa28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 RPP25Q9BUL9 199 aaKnown RBP28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 MAK16Q9BXY0 300 aaKnown RBP28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 ZMYM5Q9UJ78 669 aa28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 ZFP37Q9Y6Q3 630 aaPredicted RBP28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 HEPACAM2A8MVW5 462 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 F5H5T6 163 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 PGRMC1O00264 195 aaKnown RBP28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 COPS2P61201 443 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 IRX1P78414 480 aaPredicted RBP28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 KLF1Q13351 362 aaPredicted RBP28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 PPP2R5EQ16537 467 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 TRIM68Q6AZZ1 485 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 C1orf228Q6PIY5 440 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 B4GALNT4Q76KP1 1039 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 ACTRT1Q8TDG2 376 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 FGF14Q92915 247 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 TBC1D31Q96DN5 1066 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 ASIC4Q96FT7 647 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 E2F8A0AVK6 867 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 CES2O00748 559 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 PECAM1P16284 738 aaPredicted RBP28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 FAM182AQ5T1J6 154 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 DDX42Q86XP3 938 aaKnown RBP eCLIP28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 PLD5Q8N7P1 536 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 ATG4AQ8WYN0 398 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 AZIN2Q96A70 460 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 PLK2Q9NYY3 685 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 STIM2Q9P246 746 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 STOML2Q9UJZ1 356 aa28.3■■■□□ 2.12
SMARCD3-201ENST00000262188 SMAD4Q13485 552 aaKnown RBP28.29■■■□□ 2.12
SMARCD3-201ENST00000262188 SIX1Q15475 284 aaPredicted RBP28.29■■■□□ 2.12
SMARCD3-201ENST00000262188 NCBP2-AS2Q69YL0 99 aa28.29■■■□□ 2.12
SMARCD3-201ENST00000262188 NPWQ8N729 165 aa28.29■■■□□ 2.12
SMARCD3-201ENST00000262188 LRRN4CLQ8ND94 238 aa28.29■■■□□ 2.12
SMARCD3-201ENST00000262188 TRAF3IP1Q8TDR0 691 aaPredicted RBP28.29■■■□□ 2.12
SMARCD3-201ENST00000262188 NECTIN4Q96NY8 510 aa28.29■■■□□ 2.12
SMARCD3-201ENST00000262188 PTPN7P35236 360 aa28.28■■■□□ 2.12
SMARCD3-201ENST00000262188 GRM2Q14416 872 aa28.28■■■□□ 2.12
SMARCD3-201ENST00000262188 VITQ6UXI7 678 aa28.28■■■□□ 2.12
SMARCD3-201ENST00000262188 LRRC31Q6UY01 552 aa28.28■■■□□ 2.12
SMARCD3-201ENST00000262188 MYOFQ9NZM1 2061 aa28.28■■■□□ 2.12
SMARCD3-201ENST00000262188 DCLK1O15075 740 aa28.28■■■□□ 2.12
SMARCD3-201ENST00000262188 CETN2P41208 172 aa28.28■■■□□ 2.12
SMARCD3-201ENST00000262188 NRG1Q02297 640 aaPredicted RBP28.28■■■□□ 2.12
SMARCD3-201ENST00000262188 GBE1Q04446 702 aa28.28■■■□□ 2.12
SMARCD3-201ENST00000262188 C1orf54Q8WWF1 131 aa28.28■■■□□ 2.12
SMARCD3-201ENST00000262188 PLCD4Q9BRC7 762 aa28.28■■■□□ 2.12
SMARCD3-201ENST00000262188 ZFP14Q9HCL3 533 aa28.28■■■□□ 2.12
SMARCD3-201ENST00000262188 HEY1Q9Y5J3 304 aa28.28■■■□□ 2.12
SMARCD3-201ENST00000262188 IGLV3-10A0A075B6K4 115 aa28.27■■■□□ 2.12
SMARCD3-201ENST00000262188 SEC31AO94979 1220 aaKnown RBP28.27■■■□□ 2.12
SMARCD3-201ENST00000262188 SLC10A2Q12908 348 aaPredicted RBP28.27■■■□□ 2.12
SMARCD3-201ENST00000262188 MAP9Q49MG5 647 aa28.27■■■□□ 2.12
SMARCD3-201ENST00000262188 TDRD5Q8NAT2 981 aaKnown RBP28.27■■■□□ 2.12
SMARCD3-201ENST00000262188 BPIFB1Q8TDL5 484 aa28.27■■■□□ 2.12
SMARCD3-201ENST00000262188 RSAD2Q8WXG1 361 aa28.27■■■□□ 2.12
SMARCD3-201ENST00000262188 RCOR3Q9P2K3 495 aaPredicted RBP28.27■■■□□ 2.12
SMARCD3-201ENST00000262188 APOL1O14791 398 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 MFSD11O43934 449 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 WEE1P30291 646 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 HOXC13P31276 330 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 SLC9A4Q6AI14 798 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 BBS12Q6ZW61 710 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 FAM217AQ8IXS0 508 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 MAFAQ8NHW3 353 aaPredicted RBP28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 CELF6Q96J87 481 aaKnown RBP28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 CARD6Q9BX69 1037 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 ZYG11BQ9C0D3 744 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 C10orf88Q9H8K7 445 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 TRPV4Q9HBA0 871 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 TTC7AQ9ULT0 858 aaPredicted RBP28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 DRGXA6NNA5 263 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 C2CD4DB7Z1M9 353 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 GFRA2O00451 464 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 LATS1O95835 1130 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 HCAR3P49019 387 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 MNAT1P51948 309 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 C2orf54Q08AI8 447 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 NLRP14Q86W24 1093 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 TMEM25Q86YD3 366 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 KIF9Q9HAQ2 790 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 DOCK4Q8N1I0 1966 aa28.26■■■□□ 2.11
SMARCD3-201ENST00000262188 KRIT1O00522 736 aa28.25■■■□□ 2.11
SMARCD3-201ENST00000262188 TBL1XO60907 577 aa28.25■■■□□ 2.11
SMARCD3-201ENST00000262188 TJP3O95049 919 aa28.25■■■□□ 2.11
SMARCD3-201ENST00000262188 PAFAH1B1P43034 410 aa28.25■■■□□ 2.11
SMARCD3-201ENST00000262188 RPGRIP1Q96KN7 1286 aa28.25■■■□□ 2.11
SMARCD3-201ENST00000262188 DUS2Q9NX74 493 aaKnown RBP28.25■■■□□ 2.11
SMARCD3-201ENST00000262188 ARSAP15289 507 aa28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 TCF3P15923 654 aa28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 TNK2Q07912 1038 aa28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 SNX1Q13596 522 aa28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 WHAMMP3Q1A5X7 153 aa28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 PRELID2Q8N945 189 aa28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 OR52K2Q8NGK3 314 aa28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 ZNF212Q9UDV6 495 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms