RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 MTF2Q9Y483 593 aaPredicted RBP13.32□□□□□ -0.28
SNX1-201ENST00000261889 V9GYQ6 96 aa13.32□□□□□ -0.28
SNX1-201ENST00000261889 EVPLQ92817 2033 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 MFSD11O43934 449 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 CRTAMO95727 393 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 TFAP2AP05549 437 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 STAG3L1P0CL83 205 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 EPHX2P34913 555 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 CERCAMQ5T4B2 595 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 MYO1HQ8N1T3 1032 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 ZC3H15Q8WU90 426 aaKnown RBP13.31□□□□□ -0.28
SNX1-201ENST00000261889 C20orf96Q9NUD7 363 aaPredicted RBP13.31□□□□□ -0.28
SNX1-201ENST00000261889 SFMBT1Q9UHJ3 866 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 SF3B1O75533 1304 aaKnown RBP eCLIP13.31□□□□□ -0.284e-7■■■■■ 86.2
SNX1-201ENST00000261889 A0A087WZ62 844 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 ATP6AP2A0A1C7CYW4 349 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 VILLO15195 856 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 CHADO15335 359 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 ATP6AP2O75787 350 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 SMIM18P0DKX4 95 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 FDFT1P37268 417 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 SOWAHAQ2M3V2 549 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 FBXO48Q5FWF7 155 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 NIPA2Q8N8Q9 360 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 OR6B3Q8NGW1 331 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 ATP6V1E2Q96A05 226 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 FDXACB1Q9BRP7 624 aaPredicted RBP13.31□□□□□ -0.28
SNX1-201ENST00000261889 CNPY3Q9BT09 278 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 CAAP1Q9H8G2 361 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 GOLGA2P5Q9HBQ8 144 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 PDGFCQ9NRA1 345 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 KLK14Q9P0G3 267 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 HSFX1Q9UBD0 423 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 ZNF112Q9UJU3 913 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 STYXL1Q9Y6J8 313 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 A0A0G2JMZ2 1700 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 F8W8V4 182 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 SUPT3HO75486 399 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 CRHR1P34998 444 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 STT3AP46977 705 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 NAGLUP54802 743 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 KLF10Q13118 480 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 KCTD21Q4G0X4 260 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 UGT2A3Q6UWM9 527 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 STRA8Q7Z7C7 330 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 LCA5Q86VQ0 697 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 RAB3IL1Q8TBN0 382 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 LRGUKQ96M69 825 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 SNX15Q9NRS6 342 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 HACL1Q9UJ83 578 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 NME7Q9Y5B8 376 aa13.31□□□□□ -0.28
SNX1-201ENST00000261889 FAM149AA5PLN7 773 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 MT-ND1P03886 318 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 FAM200BP0CF97 657 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 HNRNPLP14866 589 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNX1-201ENST00000261889 CPA3P15088 417 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 FUT4P22083 530 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 TFDP2Q14188 446 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 STXBP2Q15833 593 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 PID1Q7Z2X4 250 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 TDRD5Q8NAT2 981 aaKnown RBP13.3□□□□□ -0.28
SNX1-201ENST00000261889 EMID1Q96A84 441 aaPredicted RBP13.3□□□□□ -0.28
SNX1-201ENST00000261889 C18orf25Q96B23 403 aaPredicted RBP13.3□□□□□ -0.28
SNX1-201ENST00000261889 KLHL32Q96NJ5 620 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 NR1H4Q96RI1 486 aaPredicted RBP13.3□□□□□ -0.28
SNX1-201ENST00000261889 DTLQ9NZJ0 730 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 COPG2Q9UBF2 871 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 GNEQ9Y223 722 aaKnown RBP13.3□□□□□ -0.28
SNX1-201ENST00000261889 SPATA31C2B4DYI2 1134 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 RNF103O00237 685 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 STAMBPO95630 424 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 PRKCHP24723 683 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 ABCE1P61221 599 aaKnown RBP13.3□□□□□ -0.28
SNX1-201ENST00000261889 MYBPC1Q00872 1141 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 ANKRD20A4Q4UJ75 823 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 EFCAB12Q6NXP0 572 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 KCTD15Q96SI1 283 aaPredicted RBP13.3□□□□□ -0.28
SNX1-201ENST00000261889 AP4E1Q9UPM8 1137 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 AKT3Q9Y243 479 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 ZNF711Q9Y462 761 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 PPME1Q9Y570 386 aa13.3□□□□□ -0.28
SNX1-201ENST00000261889 PLOD2O00469 737 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 ABLIM1O14639 778 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 FARP2O94887 1054 aaPredicted RBP13.29□□□□□ -0.28
SNX1-201ENST00000261889 PFKMP08237 780 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 ACAT1P24752 427 aaKnown RBP13.29□□□□□ -0.28
SNX1-201ENST00000261889 PSMD7P51665 324 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 LSAMPQ13449 338 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 CEACAM7Q14002 265 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 TREML2Q5T2D2 321 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 TMCO4Q5TGY1 634 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 GK5Q6ZS86 529 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 CHST15Q7LFX5 561 aaPredicted RBP13.29□□□□□ -0.28
SNX1-201ENST00000261889 FBXW8Q8N3Y1 598 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 DRAXINQ8NBI3 349 aaPredicted RBP13.29□□□□□ -0.28
SNX1-201ENST00000261889 VCX3BQ9H321 246 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 VCX3AQ9NNX9 186 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 DDX43Q9NXZ2 648 aaKnown RBP13.29□□□□□ -0.28
SNX1-201ENST00000261889 GIMAP2Q9UG22 337 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 DOLKQ9UPQ8 538 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms