RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 SPATA31C2B4DYI2 1134 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 MAFGO15525 162 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 JUNP05412 331 aaKnown RBP16.28■□□□□ 0.2
LMNB1-201ENST00000261366 P4HA1P13674 534 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 TGM2P21980 687 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 TPP2P29144 1249 aaPredicted RBP16.28■□□□□ 0.2
LMNB1-201ENST00000261366 DPP6P42658 865 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 MAGEA3P43357 314 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 STAT5BP51692 787 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 JADE1Q6IE81 842 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 ZBTB46Q86UZ6 589 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 C7orf31Q8N865 590 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 MCUQ8NE86 351 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 KLHL32Q96NJ5 620 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 CCT7Q99832 543 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 APOL2Q9BQE5 337 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 RTKNQ9BST9 563 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 SLC4A5Q9BY07 1137 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 C6orf203Q9P0P8 240 aaPredicted RBP16.28■□□□□ 0.2
LMNB1-201ENST00000261366 SH3BP1Q9Y3L3 701 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 WDR81Q562E7 1941 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 PAPSS1O43252 624 aaPredicted RBP16.28■□□□□ 0.2
LMNB1-201ENST00000261366 DENRO43583 198 aaKnown RBP16.28■□□□□ 0.2
LMNB1-201ENST00000261366 CILPO75339 1184 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 TRMUO75648 421 aaKnown RBP16.28■□□□□ 0.2
LMNB1-201ENST00000261366 ATP5BP06576 529 aaKnown RBP16.28■□□□□ 0.2
LMNB1-201ENST00000261366 CDH15P55291 814 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 GHRHRQ02643 423 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 TMEM62Q0P6H9 643 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 ART3Q13508 389 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 GOLGA7BQ2TAP0 167 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 ATF7IP2Q5U623 682 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 EPGNQ6UW88 154 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 ZPBP2Q6X784 338 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 PCDH20Q8N6Y1 951 aaKnown RBP16.28■□□□□ 0.2
LMNB1-201ENST00000261366 ATP6V1E2Q96A05 226 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 PCYT2Q99447 389 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 MRPS26Q9BYN8 205 aaKnown RBP16.28■□□□□ 0.2
LMNB1-201ENST00000261366 RPF1Q9H9Y2 349 aaKnown RBP16.28■□□□□ 0.2
LMNB1-201ENST00000261366 C20orf96Q9NUD7 363 aaPredicted RBP16.28■□□□□ 0.2
LMNB1-201ENST00000261366 LACTBL1A8MY62 500 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 NFKBIEO00221 500 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 GOT1P17174 413 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 DESP17661 470 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 PSMB4P28070 264 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 AVPR1AP37288 418 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 STT3AP46977 705 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 TMEM132BQ14DG7 1078 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 AMHR2Q16671 573 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 LSM12Q3MHD2 195 aaKnown RBP16.27■□□□□ 0.2
LMNB1-201ENST00000261366 BOLA3Q53S33 107 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 HSP90AA5PQ58FG0 334 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 ACBD5Q5T8D3 534 aaPredicted RBP16.27■□□□□ 0.2
LMNB1-201ENST00000261366 NBPF12Q5TAG4 269 aaPredicted RBP16.27■□□□□ 0.2
LMNB1-201ENST00000261366 KLC3Q6P597 504 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 STRA8Q7Z7C7 330 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 ZBTB8OSQ8IWT0 167 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 TP53INP2Q8IXH6 220 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 MICALL2Q8IY33 904 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 SPATA6LQ8N4H0 392 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 GAB3Q8WWW8 586 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 SIKE1Q9BRV8 207 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 RBM38Q9H0Z9 239 aaKnown RBP16.27■□□□□ 0.2
LMNB1-201ENST00000261366 PCDHAC1Q9H158 963 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 VPS33BQ9H267 617 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 TMEM134Q9H6X4 195 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 DMTF1Q9Y222 760 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 CDY2AQ9Y6F7 541 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 CDY1Q9Y6F8 540 aa16.27■□□□□ 0.2
LMNB1-201ENST00000261366 TK2O00142 265 aa16.27■□□□□ 0.19
LMNB1-201ENST00000261366 STRNO43815 780 aa16.27■□□□□ 0.19
LMNB1-201ENST00000261366 ABCD1P33897 745 aa16.27■□□□□ 0.19
LMNB1-201ENST00000261366 NIPAL4Q0D2K0 466 aa16.27■□□□□ 0.19
LMNB1-201ENST00000261366 PDK2Q15119 407 aa16.27■□□□□ 0.19
LMNB1-201ENST00000261366 SLC9A4Q6AI14 798 aa16.27■□□□□ 0.19
LMNB1-201ENST00000261366 LRRC8BQ6P9F7 803 aa16.27■□□□□ 0.19
LMNB1-201ENST00000261366 TIFABQ6ZNK6 161 aa16.27■□□□□ 0.19
LMNB1-201ENST00000261366 MYO1HQ8N1T3 1032 aa16.27■□□□□ 0.19
LMNB1-201ENST00000261366 SLC16A10Q8TF71 515 aa16.27■□□□□ 0.19
LMNB1-201ENST00000261366 ZNF669Q96BR6 464 aaPredicted RBP16.27■□□□□ 0.19
LMNB1-201ENST00000261366 RTP4Q96DX8 246 aa16.27■□□□□ 0.19
LMNB1-201ENST00000261366 SERPINI1Q99574 410 aa16.27■□□□□ 0.19
LMNB1-201ENST00000261366 MINDY3Q9H8M7 445 aa16.27■□□□□ 0.19
LMNB1-201ENST00000261366 MAP3K20Q9NYL2 800 aaKnown RBP16.27■□□□□ 0.19
LMNB1-201ENST00000261366 RIMS3Q9UJD0 308 aa16.27■□□□□ 0.19
LMNB1-201ENST00000261366 A0A096LPK6 155 aa16.26■□□□□ 0.19
LMNB1-201ENST00000261366 PDLIM1O00151 329 aa16.26■□□□□ 0.19
LMNB1-201ENST00000261366 KCNK1O00180 336 aa16.26■□□□□ 0.19
LMNB1-201ENST00000261366 ZSCAN9O15535 394 aaPredicted RBP16.26■□□□□ 0.19
LMNB1-201ENST00000261366 HCRTO43612 131 aa16.26■□□□□ 0.19
LMNB1-201ENST00000261366 RNASEH2AO75792 299 aaKnown RBP16.26■□□□□ 0.19
LMNB1-201ENST00000261366 PIM1P11309 404 aaPredicted RBP16.26■□□□□ 0.19
LMNB1-201ENST00000261366 SH3BGRP55822 239 aaPredicted RBP16.26■□□□□ 0.19
LMNB1-201ENST00000261366 PRAMEP78395 509 aa16.26■□□□□ 0.19
LMNB1-201ENST00000261366 SH3D19Q5HYK7 790 aa16.26■□□□□ 0.19
LMNB1-201ENST00000261366 ACOT1Q86TX2 421 aa16.26■□□□□ 0.19
LMNB1-201ENST00000261366 APBB2Q92870 758 aa16.26■□□□□ 0.19
LMNB1-201ENST00000261366 DCUN1D5Q9BTE7 237 aa16.26■□□□□ 0.19
LMNB1-201ENST00000261366 GATA5Q9BWX5 397 aaPredicted RBP16.26■□□□□ 0.19
LMNB1-201ENST00000261366 STN1Q9H668 368 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms