RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 NXPE3Q969Y0 559 aa16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 MS4A14Q96JA4 679 aa16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 BBS2Q9BXC9 721 aa16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 CATSPERBQ9H7T0 1116 aa16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 TMEM248Q9NWD8 314 aa16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 MARK1Q9P0L2 795 aa16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 EFR3BQ9Y2G0 817 aa16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 DOCK4Q8N1I0 1966 aa16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 MYOFQ9NZM1 2061 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 A0A1B0GVM2 712 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 TCRBV7S2A1N4TA0A589 114 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 TYW5A2RUC4 315 aaKnown RBP16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 TCAF2A6NFQ2 919 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 WASH4PA8MWX3 477 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 NEDD8-MDP1E9PL57 170 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 CES2O00748 559 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 CST8O60676 142 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 CETN2P41208 172 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 CDH4P55283 916 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 DYNLT1P63172 113 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 RUNX3Q13761 415 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 RNF43Q68DV7 783 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 CHST9Q7L1S5 443 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 NPWQ8N729 165 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 KIF18AQ8NI77 898 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 ATXN2LQ8WWM7 1075 aaKnown RBP16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 MAK16Q9BXY0 300 aaKnown RBP16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 BRD9Q9H8M2 597 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 ECT2Q9H8V3 914 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 GTSE1Q9NYZ3 720 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 SMARCAL1Q9NZC9 954 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 PRKAG3Q9UGI9 489 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 CLEC4EQ9ULY5 219 aa16.26■□□□□ 0.19
CCDC90B-201ENST00000260054 CLDN11O75508 207 aa16.25■□□□□ 0.19
CCDC90B-201ENST00000260054 ADH1CP00326 375 aa16.25■□□□□ 0.19
CCDC90B-201ENST00000260054 FGGP02679 453 aa16.25■□□□□ 0.19
CCDC90B-201ENST00000260054 ADH5P11766 374 aa16.25■□□□□ 0.19
CCDC90B-201ENST00000260054 TYRP14679 529 aa16.25■□□□□ 0.19
CCDC90B-201ENST00000260054 KLF1Q13351 362 aaPredicted RBP16.25■□□□□ 0.19
CCDC90B-201ENST00000260054 GAB4Q2WGN9 574 aa16.25■□□□□ 0.19
CCDC90B-201ENST00000260054 BBS12Q6ZW61 710 aa16.25■□□□□ 0.19
CCDC90B-201ENST00000260054 SLC13A5Q86YT5 568 aaPredicted RBP16.25■□□□□ 0.19
CCDC90B-201ENST00000260054 CREG2Q8IUH2 290 aa16.25■□□□□ 0.19
CCDC90B-201ENST00000260054 OR52K2Q8NGK3 314 aa16.25■□□□□ 0.19
CCDC90B-201ENST00000260054 TTC8Q8TAM2 541 aa16.25■□□□□ 0.19
CCDC90B-201ENST00000260054 WFDC5Q8TCV5 224 aa16.25■□□□□ 0.19
CCDC90B-201ENST00000260054 KLC2Q9H0B6 622 aa16.25■□□□□ 0.19
CCDC90B-201ENST00000260054 COL4A3Q01955 1670 aa16.25■□□□□ 0.19
CCDC90B-201ENST00000260054 APOL1O14791 398 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 HOXC11O43248 304 aaPredicted RBP16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 LUC7L3O95232 432 aaKnown RBP16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 BMP1P13497 986 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 OR1E1P30953 314 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 GAD2Q05329 585 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 TFDP2Q14188 446 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 FSCBQ5H9T9 825 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 CXorf57Q6NSI4 855 aaKnown RBP16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 TMCO3Q6UWJ1 677 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 ADAT2Q7Z6V5 191 aaKnown RBP16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 CARNMT1Q8N4J0 409 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 CPA6Q8N4T0 437 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 NETO2Q8NC67 525 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 CAPZA3Q96KX2 299 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 ASB2Q96Q27 587 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 SAE1Q9UBE0 346 aaPredicted RBP16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 TTC7AQ9ULT0 858 aaPredicted RBP16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 MYO10Q9HD67 2058 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 MFSD11O43934 449 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 URI1O94763 535 aaPredicted RBP16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 TJP3O95049 919 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 MAPKAPK2P49137 400 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 GBE1Q04446 702 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 ZNF177Q13360 481 aaPredicted RBP16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 PAFAH1B3Q15102 231 aaKnown RBP16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 NPNTQ6UXI9 565 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 C12orf40Q86WS4 652 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 MFN1Q8IWA4 741 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 TP53INP2Q8IXH6 220 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 ACTRT1Q8TDG2 376 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 HAUS1Q96CS2 278 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 RETREG1Q9H6L5 497 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 NOL6Q9H6R4 1146 aaKnown RBP16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 TBC1D30Q9Y2I9 924 aa16.24■□□□□ 0.19
CCDC90B-201ENST00000260054 H0Y626 953 aa16.23■□□□□ 0.19
CCDC90B-201ENST00000260054 NARSO43776 548 aaKnown RBP16.23■□□□□ 0.19
CCDC90B-201ENST00000260054 MAP3K6O95382 1288 aa16.23■□□□□ 0.19
CCDC90B-201ENST00000260054 PECAM1P16284 738 aaPredicted RBP16.23■□□□□ 0.19
CCDC90B-201ENST00000260054 ZFXP17010 805 aaPredicted RBP16.23■□□□□ 0.19
CCDC90B-201ENST00000260054 SLC10A2Q12908 348 aaPredicted RBP16.23■□□□□ 0.19
CCDC90B-201ENST00000260054 CDH18Q13634 790 aa16.23■□□□□ 0.19
CCDC90B-201ENST00000260054 SIX1Q15475 284 aaPredicted RBP16.23■□□□□ 0.19
CCDC90B-201ENST00000260054 LONRF2Q1L5Z9 754 aa16.23■□□□□ 0.19
CCDC90B-201ENST00000260054 ITPRIPL2Q3MIP1 535 aa16.23■□□□□ 0.19
CCDC90B-201ENST00000260054 C1orf228Q6PIY5 440 aa16.23■□□□□ 0.19
CCDC90B-201ENST00000260054 SETD3Q86TU7 594 aaPredicted RBP16.23■□□□□ 0.19
CCDC90B-201ENST00000260054 ETFBKMTQ8IXQ9 262 aa16.23■□□□□ 0.19
CCDC90B-201ENST00000260054 UMODL1-AS1Q8N2C9 162 aa16.23■□□□□ 0.19
CCDC90B-201ENST00000260054 NAT16Q8N8M0 369 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms