RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 H0YGN5 161 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 PGRMC1O00264 195 aaKnown RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 SH2B2O14492 632 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 GMDSO60547 372 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 MAGEC1O60732 1142 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 CRTAPO75718 401 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 FABP1P07148 127 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 ASNSP08243 561 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 ARF4P18085 180 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 GSTM5P46439 218 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 FNTBP49356 437 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 EIF3BP55884 814 aaKnown RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 RACK1P63244 317 aaKnown RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 GRB10Q13322 594 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 TOP3AQ13472 1001 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 FASTKD3Q14CZ7 662 aaKnown RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 THEM4Q5T1C6 240 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 KANK2Q63ZY3 851 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 NLRC3Q7RTR2 1065 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 FAM178BQ8IXR5 827 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 ARFGAP1Q8N6T3 406 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 NIPA2Q8N8Q9 360 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 MFSD2AQ8NA29 543 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 FBXO15Q8NCQ5 510 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 TRPV3Q8NET8 790 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 ZNF398Q8TD17 642 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 SYN2Q92777 582 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 MYDGFQ969H8 173 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 YIPF5Q969M3 257 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 TESCQ96BS2 214 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 PPP1R16BQ96T49 567 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 CLSTN3Q9BQT9 956 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 GCOM2Q9BZD3 368 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 KCNH7Q9NS40 1196 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 HAO1Q9UJM8 370 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 CPQQ9Y646 472 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 NFS1Q9Y697 457 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 WASF2Q9Y6W5 498 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 RTL9Q8NET4 1388 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 A0A0G2JS52 829 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 SERTM1A2A2V5 107 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 NCF1BA6NI72 391 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 NCF1CA8MVU1 366 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 CLDN3O15551 220 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 BUB1O43683 1085 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 BCAS1O75363 584 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 KCNH1O95259 989 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 PRG2P13727 222 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 NDUFV2P19404 249 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 F8A1P23610 371 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 PDHA2P29803 388 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 CARSP49589 748 aaKnown RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 P2RY4P51582 365 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 CHRNDQ07001 517 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 MORC3Q14149 939 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 TEAD4Q15561 434 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 SLC45A4Q5BKX6 768 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 TOR2AQ5JU69 321 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 RNF43Q68DV7 783 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 RINT1Q6NUQ1 792 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 SCYL2Q6P3W7 929 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 RFWD3Q6PCD5 774 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 NRSN1Q8IZ57 195 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 C4orf33Q8N1A6 199 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 OXR1Q8N573 874 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 OR6Y1Q8NGX8 325 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 TRUB1Q8WWH5 349 aaKnown RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 SLC7A6OSQ96CW6 309 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 AHCYL2Q96HN2 611 aaKnown RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 SNX18Q96RF0 628 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 LBHD1Q9BQE6 289 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 PINK1Q9BXM7 581 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 MTFR1LQ9H019 292 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 ABCG8Q9H221 673 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 RIMS4Q9H426 269 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 XKR8Q9H6D3 395 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 TLE6Q9H808 572 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 KANSL2Q9H9L4 492 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 IFT46Q9NQC8 304 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 PRDM9Q9NQV7 894 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 C20orf96Q9NUD7 363 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 TOR4AQ9NXH8 423 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 WWOXQ9NZC7 414 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 KLHL14Q9P2G3 628 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 TRMT6Q9UJA5 497 aaKnown RBP7.91□□□□□ -1.14
GPNMB-201ENST00000258733 GAB2Q9UQC2 676 aa7.91□□□□□ -1.14
GPNMB-201ENST00000258733 LRRC7Q96NW7 1537 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 OVOS2A0A0G2JMS6 1433 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 OVOS2A0A0J9YW53 1432 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 NOS1P29475 1434 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 OVOS2Q6IE36 1432 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 ZNF185O15231 689 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 CIDEAO60543 219 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 PLGP00747 810 aaPredicted RBP7.9□□□□□ -1.14
GPNMB-201ENST00000258733 FGRP09769 529 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 THRAP10827 490 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 STMN1P16949 149 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 KELP23276 732 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 ATXN1P54253 815 aaKnown RBP7.9□□□□□ -1.14
GPNMB-201ENST00000258733 RPL26P61254 145 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms