RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 ITPKCQ96DU7 683 aa11.77□□□□□ -0.53
TROAP-201ENST00000257909 ABHD8Q96I13 439 aa11.77□□□□□ -0.53
TROAP-201ENST00000257909 ILKAPQ9H0C8 392 aaPredicted RBP11.77□□□□□ -0.53
TROAP-201ENST00000257909 HIPK3Q9H422 1215 aa11.77□□□□□ -0.53
TROAP-201ENST00000257909 PICK1Q9NRD5 415 aa11.77□□□□□ -0.53
TROAP-201ENST00000257909 FBXO40Q9UH90 709 aa11.77□□□□□ -0.53
TROAP-201ENST00000257909 PTBP2Q9UKA9 531 aaKnown RBP11.77□□□□□ -0.53
TROAP-201ENST00000257909 AP4S1Q9Y587 144 aa11.77□□□□□ -0.53
TROAP-201ENST00000257909 SIP14410 1827 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 A0A087WXM4 84 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 WDR27A2RRH5 827 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 TRIM43BA6NCK2 446 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 TRIM38O00635 465 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 ITGBL1O95965 494 aaPredicted RBP11.76□□□□□ -0.53
TROAP-201ENST00000257909 MCF2P10911 925 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 GPD1P21695 349 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 ADORA2AP29274 412 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 SLC10A2Q12908 348 aaPredicted RBP11.76□□□□□ -0.53
TROAP-201ENST00000257909 SEMA5AQ13591 1074 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 STILQ15468 1287 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 DUOXA2Q1HG44 320 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 BOLA3Q53S33 107 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 SWSAP1Q6NVH7 229 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 CASC4Q6P4E1 433 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 CLVS1Q8IUQ0 354 aaPredicted RBP11.76□□□□□ -0.53
TROAP-201ENST00000257909 PQLC3Q8N755 202 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 CNTD1Q8N815 330 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 DDHD1Q8NEL9 900 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 USP13Q92995 863 aaPredicted RBP11.76□□□□□ -0.53
TROAP-201ENST00000257909 TOP1MTQ969P6 601 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 ASB9Q96DX5 294 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 HNRNPABQ99729 332 aaKnown RBP11.76□□□□□ -0.53
TROAP-201ENST00000257909 ANKRD60Q9BZ19 345 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 MTMR12Q9C0I1 747 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 RMI1Q9H9A7 625 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 LRRIQ4A6NIV6 560 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 TRIM64CA6NLI5 447 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 FAM155AB1AL88 458 aaPredicted RBP11.76□□□□□ -0.53
TROAP-201ENST00000257909 HDAC3O15379 428 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 PTPN1P18031 435 aaKnown RBP11.76□□□□□ -0.53
TROAP-201ENST00000257909 IL4RP24394 825 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 ASPAP45381 313 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 EMC2Q15006 297 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 TGFBIQ15582 683 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 ZNF699Q32M78 642 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 KCTD21Q4G0X4 260 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 PPM1JQ5JR12 505 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 FAM182AQ5T1J6 154 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 FAM102AQ5T9C2 384 aaPredicted RBP11.76□□□□□ -0.53
TROAP-201ENST00000257909 IL23RQ5VWK5 629 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 SCARA5Q6ZMJ2 495 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 ADAMTS16Q8TE57 1224 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 C12orf43Q96C57 262 aaKnown RBP11.76□□□□□ -0.53
TROAP-201ENST00000257909 THAP11Q96EK4 314 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 MPHOSPH6Q99547 160 aaKnown RBP11.76□□□□□ -0.53
TROAP-201ENST00000257909 PDCD2LQ9BRP1 358 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 NAT9Q9BTE0 207 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 MORF4L1Q9UBU8 362 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 COQ6Q9Y2Z9 468 aa11.76□□□□□ -0.53
TROAP-201ENST00000257909 FUOMA2VDF0 154 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 FBP2O00757 339 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 TRIM13O60858 407 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 OCM2P0CE71 109 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 OCMP0CE72 109 aaPredicted RBP11.75□□□□□ -0.53
TROAP-201ENST00000257909 PGAM1P18669 254 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 TTKP33981 857 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 GP5P40197 560 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 RPS6P62753 249 aaKnown RBP11.75□□□□□ -0.53
TROAP-201ENST00000257909 PRKCEQ02156 737 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 SURF1Q15526 300 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 LSM12Q3MHD2 195 aaKnown RBP11.75□□□□□ -0.53
TROAP-201ENST00000257909 DACT2Q5SW24 774 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 GRTP1Q5TC63 336 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 SEL1L3Q68CR1 1132 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 UNC5BQ8IZJ1 945 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 RNF148Q8N7C7 305 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 TERB1Q8NA31 727 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 ZNF420Q8TAQ5 688 aaPredicted RBP11.75□□□□□ -0.53
TROAP-201ENST00000257909 ATP6V1E2Q96A05 226 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 RMDN3Q96TC7 470 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 ZNF341Q9BYN7 854 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 PAIP1Q9H074 479 aaKnown RBP11.75□□□□□ -0.53
TROAP-201ENST00000257909 ZNF385DQ9H6B1 395 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 PXMP2Q9NR77 195 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 SLC17A6Q9P2U8 582 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 SUCOQ9UBS9 1254 aaKnown RBP11.75□□□□□ -0.53
TROAP-201ENST00000257909 EBF1Q9UH73 591 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 IPO11Q9UI26 975 aaKnown RBP11.75□□□□□ -0.53
TROAP-201ENST00000257909 MID2Q9UJV3 735 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 ADAM28Q9UKQ2 775 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 RAP2CQ9Y3L5 183 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 FADS3Q9Y5Q0 445 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 GOLGA8QA0A0J9YX86 632 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 GOLGA8OA6NCC3 632 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 TMEM247A6NEH6 219 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 GOLGA8NF8WBI6 632 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 PSMD12O00232 456 aaPredicted RBP11.75□□□□□ -0.53
TROAP-201ENST00000257909 ALDH2P05091 517 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 GRIA1P42261 906 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 DPP6P42658 865 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms