RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 ETNK2Q9NVF9 386 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 MAP10Q9P2G4 905 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 LZTS1Q9Y250 596 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 BTN3A1O00481 513 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 TBC1D12O60347 775 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 TPST1O60507 370 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 FAM20BO75063 409 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 HLA-DQA1Q5Y7H0 255 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 ZNF470Q6ECI4 717 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 C15orf52Q6ZUT6 534 aaKnown RBP8.88□□□□□ -0.99
PTCD3-201ENST00000254630 MILR1Q7Z6M3 343 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 SLC41A1Q8IVJ1 513 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 MTMR9Q96QG7 549 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 ACO2Q99798 780 aaKnown RBP8.88□□□□□ -0.99
PTCD3-201ENST00000254630 SEC22BO75396 215 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 MAFO75444 373 aaPredicted RBP8.87□□□□□ -0.99
PTCD3-201ENST00000254630 GJB6O95452 261 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 ATP5BP06576 529 aaKnown RBP8.87□□□□□ -0.99
PTCD3-201ENST00000254630 PSMC3P17980 439 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 GLRA2P23416 452 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 EIF4BP23588 611 aaKnown RBP8.87□□□□□ -0.99
PTCD3-201ENST00000254630 INHBEP58166 350 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 NOMO2Q5JPE7 1267 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 GJC2Q5T442 439 aaPredicted RBP8.87□□□□□ -0.99
PTCD3-201ENST00000254630 RAP1GAP2Q684P5 730 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 OLFML2BQ68BL8 750 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 CES3Q6UWW8 571 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 NPNTQ6UXI9 565 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 KATNAL2Q8IYT4 538 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 FNDC5Q8NAU1 212 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 DTNBP1Q96EV8 351 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 PALMDQ9NP74 551 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 AVENQ9NQS1 362 aaPredicted RBP8.87□□□□□ -0.99
PTCD3-201ENST00000254630 PAPOLBQ9NRJ5 636 aaKnown RBP8.87□□□□□ -0.99
PTCD3-201ENST00000254630 TMPRSS4Q9NRS4 437 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 NINJ2Q9NZG7 142 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 SH3BP4Q9P0V3 963 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 LTN1O94822 1766 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 SF3B1O75533 1304 aaKnown RBP eCLIP8.87□□□□□ -0.991e-6■■■■■ 55.1
PTCD3-201ENST00000254630 PDZK1P1A8MUH7 402 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 ZNF862O60290 1169 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 TRUB2O95900 331 aaKnown RBP8.87□□□□□ -0.99
PTCD3-201ENST00000254630 MIPP30301 263 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 SERPINH1P50454 418 aaKnown RBP8.87□□□□□ -0.99
PTCD3-201ENST00000254630 VAC14Q08AM6 782 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 MAP2K5Q13163 448 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 LYPLAL1Q5VWZ2 237 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 CDK20Q8IZL9 346 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 PPP1R13LQ8WUF5 828 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 SUSD6Q92537 303 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 SEMA4DQ92854 862 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 GLMNQ92990 594 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 BBS4Q96RK4 519 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 FTHL17Q9BXU8 183 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 COPG1Q9Y678 874 aaKnown RBP8.87□□□□□ -0.99
PTCD3-201ENST00000254630 SMIM22K7EJ46 135 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 GP5P40197 560 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 SARSP49591 514 aaKnown RBP8.87□□□□□ -0.99
PTCD3-201ENST00000254630 USP39Q53GS9 565 aaKnown RBP8.87□□□□□ -0.99
PTCD3-201ENST00000254630 RIPOR1Q6ZS17 1223 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 DENND1CQ8IV53 801 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 ACTL9Q8TC94 416 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 GRIN3AQ8TCU5 1115 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 SIKE1Q9BRV8 207 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 NOD2Q9HC29 1040 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 KCNMB3Q9NPA1 279 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 ASAH2Q9NR71 780 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 ZNF711Q9Y462 761 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 DISP2A7MBM2 1401 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 MAGEA13PA6NCF6 341 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 FAM220BPB1ANY3 271 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 CYP7B1O75881 506 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 SERPINE1P05121 402 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 CNPP09543 421 aaKnown RBP8.87□□□□□ -0.99
PTCD3-201ENST00000254630 IGFBP4P22692 258 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 POU1F1P28069 291 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 ATP5C1P36542 298 aaKnown RBP8.87□□□□□ -0.99
PTCD3-201ENST00000254630 FASTKQ14296 549 aaKnown RBP8.87□□□□□ -0.99
PTCD3-201ENST00000254630 PABPC1LQ4VXU2 614 aaKnown RBP8.87□□□□□ -0.99
PTCD3-201ENST00000254630 FBXL19Q6PCT2 694 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 CACUL1Q86Y37 369 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 ZNF655Q8N720 491 aaPredicted RBP8.87□□□□□ -0.99
PTCD3-201ENST00000254630 MCOLN3Q8TDD5 553 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 GAD1Q99259 594 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 CORO1BQ9BR76 489 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 BBS2Q9BXC9 721 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 PARVBQ9HBI1 364 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 BTBD7Q9P203 1132 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 ADAM30Q9UKF2 790 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 NAALADL1Q9UQQ1 740 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 PCDHGA4Q9Y5G9 962 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 CYP3A7-CYP3A51PA0A087WV96 503 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 PSMD10O75832 226 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 ACADSP16219 412 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 CYP3A7P24462 503 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 NCF4Q15080 339 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 PCBP1Q15365 356 aaKnown RBP eCLIP8.87□□□□□ -0.99
PTCD3-201ENST00000254630 PARP6Q2NL67 630 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 ZNF544Q6NX49 715 aa8.87□□□□□ -0.99
PTCD3-201ENST00000254630 PLPPR4Q7Z2D5 763 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms