RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 FAM124AQ86V42 546 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 ELOA2Q8IYF1 753 aaPredicted RBP10.71□□□□□ -0.69
VPS50-201ENST00000251739 HJURPQ8NCD3 748 aaPredicted RBP10.71□□□□□ -0.69
VPS50-201ENST00000251739 FIBINQ8TAL6 211 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 DQX1Q8TE96 717 aaKnown RBP10.71□□□□□ -0.69
VPS50-201ENST00000251739 SMARCE1Q969G3 411 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 TTC17Q96AE7 1141 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 SLC39A13Q96H72 371 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 DHTKD1Q96HY7 919 aaPredicted RBP10.71□□□□□ -0.69
VPS50-201ENST00000251739 MRGPRX3Q96LB0 322 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 MIR1-1HGQ9H1L0 117 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 RSPH9Q9H1X1 276 aaPredicted RBP10.71□□□□□ -0.69
VPS50-201ENST00000251739 GAREM1Q9H706 876 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 TM7SF3Q9NS93 570 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 KIAA1522Q9P206 1035 aaPredicted RBP10.71□□□□□ -0.69
VPS50-201ENST00000251739 PLA2G4CQ9UP65 541 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 FCF1Q9Y324 198 aaKnown RBP10.71□□□□□ -0.69
VPS50-201ENST00000251739 HELZ2Q9BYK8 2649 aaKnown RBP10.71□□□□□ -0.7
VPS50-201ENST00000251739 PTPRQQ9UMZ3 2332 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 ITIH6Q6UXX5 1313 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 GOLGA6L7A0A1B0GV03 622 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 M0QYV0 167 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 FLRT2O43155 660 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 PAPSS1O43252 624 aaPredicted RBP10.7□□□□□ -0.7
VPS50-201ENST00000251739 TBL1XO60907 577 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 SEMA4FO95754 770 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 IGHV4-34P06331 123 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 ATP5BP06576 529 aaKnown RBP10.7□□□□□ -0.7
VPS50-201ENST00000251739 RDXP35241 583 aaKnown RBP10.7□□□□□ -0.7
VPS50-201ENST00000251739 SLC11A2P49281 568 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 CSNK1EP49674 416 aaKnown RBP10.7□□□□□ -0.7
VPS50-201ENST00000251739 MARSP56192 900 aaKnown RBP10.7□□□□□ -0.7
VPS50-201ENST00000251739 TBX4P57082 545 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 RPS24P62847 133 aaKnown RBP10.7□□□□□ -0.7
VPS50-201ENST00000251739 ARID5AQ03989 594 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 KIF19Q2TAC6 998 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 HNRNPA1L2Q32P51 320 aaKnown RBP10.7□□□□□ -0.7
VPS50-201ENST00000251739 ZNF776Q68DI1 518 aaPredicted RBP10.7□□□□□ -0.7
VPS50-201ENST00000251739 LYPD8Q6UX82 237 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 USP30Q70CQ3 517 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 ARHGEF19Q8IW93 802 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 TRIM59Q8IWR1 403 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 UNC45BQ8IWX7 931 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 PPM1KQ8N3J5 372 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 PNPLA1Q8N8W4 532 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 ZNF557Q8N988 423 aaPredicted RBP10.7□□□□□ -0.7
VPS50-201ENST00000251739 KDM1BQ8NB78 822 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 GOLGA1Q92805 767 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 BIRC7Q96CA5 298 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 KREMEN1Q96MU8 473 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 TM9SF3Q9HD45 589 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 MAN1B1Q9UKM7 699 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 APOBEC2Q9Y235 224 aaKnown RBP10.7□□□□□ -0.7
VPS50-201ENST00000251739 PCDHB4Q9Y5E5 795 aa10.7□□□□□ -0.7
VPS50-201ENST00000251739 ASXL3Q9C0F0 2248 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 DOCK4Q8N1I0 1966 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 PIK3R2O00459 728 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 PCDHGA12O60330 932 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 IGLV3-25P01717 112 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 ASLP04424 464 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 CD27P26842 260 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 PPP1R2P41236 205 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 CSKP41240 450 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 CTSKP43235 329 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 GPD2P43304 727 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 SCAPQ12770 1279 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 EIF4EBP2Q13542 120 aaPredicted RBP10.69□□□□□ -0.7
VPS50-201ENST00000251739 TTC31Q49AM3 519 aaPredicted RBP10.69□□□□□ -0.7
VPS50-201ENST00000251739 MS4A13Q5J8X5 152 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 MFN1Q8IWA4 741 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 IGSF8Q969P0 613 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 SERPINB11Q96P15 392 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 BTBD1Q9H0C5 482 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 NUCKS1Q9H1E3 243 aaKnown RBP10.69□□□□□ -0.7
VPS50-201ENST00000251739 PABPC3Q9H361 631 aaKnown RBP10.69□□□□□ -0.7
VPS50-201ENST00000251739 MTG2Q9H4K7 406 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 SGK2Q9HBY8 427 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 SERGEFQ9UGK8 458 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 ADAMTS1Q9UHI8 967 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 CYTH4Q9UIA0 394 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 SCML1Q9UN30 329 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 TLR6Q9Y2C9 796 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 BTBD3Q9Y2F9 522 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 PCDHB9Q9Y5E1 797 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 SNX11Q9Y5W9 270 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 CFAP46Q8IYW2 2715 aa10.69□□□□□ -0.7
VPS50-201ENST00000251739 MYLKQ15746 1914 aa10.68□□□□□ -0.7
VPS50-201ENST00000251739 SART1O43290 800 aaKnown RBP10.68□□□□□ -0.7
VPS50-201ENST00000251739 KALRNO60229 2985 aa10.68□□□□□ -0.7
VPS50-201ENST00000251739 SIN3BO75182 1162 aa10.68□□□□□ -0.7
VPS50-201ENST00000251739 DNTTP04053 509 aa10.68□□□□□ -0.7
VPS50-201ENST00000251739 ATXN1LP0C7T5 689 aaKnown RBP10.68□□□□□ -0.7
VPS50-201ENST00000251739 POLR2EP19388 210 aaKnown RBP10.68□□□□□ -0.7
VPS50-201ENST00000251739 STIM1Q13586 685 aa10.68□□□□□ -0.7
VPS50-201ENST00000251739 MORC3Q14149 939 aa10.68□□□□□ -0.7
VPS50-201ENST00000251739 KCNJ12Q14500 433 aa10.68□□□□□ -0.7
VPS50-201ENST00000251739 CCDC40Q4G0X9 1142 aa10.68□□□□□ -0.7
VPS50-201ENST00000251739 FSCBQ5H9T9 825 aa10.68□□□□□ -0.7
VPS50-201ENST00000251739 PITRM1Q5JRX3 1037 aa10.68□□□□□ -0.7
VPS50-201ENST00000251739 KCNT1Q5JUK3 1230 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms