RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 MSI1O43347 362 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 MMP3P08254 477 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 SERPINB4P48594 390 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 PLK1P53350 603 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 NFYCQ13952 458 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 RIPOR1Q6ZS17 1223 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 HORMAD1Q86X24 394 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 ZNF555Q8NEP9 628 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 KREMEN1Q96MU8 473 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 TCF25Q9BQ70 676 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 CCNT2O60583 730 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 STMN1P16949 149 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 YWHAQP27348 245 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 KCNK10P57789 538 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 PLOD1Q02809 727 aaPredicted RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 KRT72Q14CN4 511 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 AGAP9Q5VTM2 703 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 GRAMD4Q6IC98 578 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 KIAA2013Q8IYS2 634 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 NSL1Q96IY1 281 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 SPATA16Q9BXB7 569 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 HSD3B7Q9H2F3 369 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 PPIEQ9UNP9 301 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 DUOX1Q9NRD9 1551 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 GLP2RO95838 553 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 CYP1A2P05177 515 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 NFKB1P19838 968 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 NFKBIAP25963 317 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 PSMB4P28070 264 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 MAT2AP31153 395 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 MARSP56192 900 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 MAXP61244 160 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 SEMG2Q02383 582 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 PLCL1Q15111 1095 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 AARS2Q5JTZ9 985 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 KCNMB4Q86W47 210 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 FAM71AQ8IYT1 594 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 SAMD3Q8N6K7 520 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 NDNQ99608 321 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 TPSD1Q9BZJ3 242 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 CAAP1Q9H8G2 361 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 TRPM5Q9NZQ8 1165 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 UMODL1Q5DID0 1318 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 ATP6V1B1P15313 513 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 RAP1GDS1P52306 607 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 DSG1Q02413 1049 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 RASAL3Q86YV0 1011 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 DENND1CQ8IV53 801 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 AGGF1Q8N302 714 aaeCLIP4.8□□□□□ -1.644e-7■■■■□ 23.4
RAP1B-201ENST00000250559 PARP8Q8N3A8 854 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 EPS8L1Q8TE68 723 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 EXOC2Q96KP1 924 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 MFSD14AQ96MC6 490 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 GPAMQ9HCL2 828 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 AAR2Q9Y312 384 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 TRPV2Q9Y5S1 764 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 STRNO43815 780 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 SNRPB2P08579 225 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 MSX2P35548 267 aaPredicted RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 PBX1P40424 430 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 CDC16Q13042 620 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 MED21Q13503 144 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 POLNQ7Z5Q5 900 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 ILKAPQ9H0C8 392 aaPredicted RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 LRRC40Q9H9A6 602 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 CAB39LQ9H9S4 337 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 XRN1Q8IZH2 1706 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 ANXA9O76027 345 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 C4BPAP04003 597 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 HIST1H2AGP0C0S8 130 aaPredicted RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 SLC2A3P11169 496 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 HIST1H2ADP20671 130 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 LRRC55Q6ZSA7 311 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 HIST1H2AHQ96KK5 128 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 SEPHS2Q99611 448 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 HIST1H2AJQ99878 128 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 ECSITQ9BQ95 431 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 H2AFJQ9BTM1 129 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 IPPQ9Y573 584 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 HNRNPCL2B2RXH8 293 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 SPATA31C2B4DYI2 1134 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 PAPSS1O43252 624 aaPredicted RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 LIASO43766 372 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 HNRNPCL1O60812 293 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 CLASP2O75122 1294 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 FMO4P31512 558 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 GATMP50440 423 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 ITGA9Q13797 1035 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 INPP5AQ14642 412 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 POLD3Q15054 466 aaPredicted RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 MRNIPQ6NTE8 343 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 ZNF410Q86VK4 478 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 TMEM139Q8IV31 216 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 UNC45BQ8IWX7 931 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 BRI3BPQ8WY22 251 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 BRD8Q9H0E9 1235 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 AFDNP55196 1824 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 ENO4A6NNW6 628 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 DNAJC8O75937 253 aaPredicted RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 MYOGP15173 224 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms