RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 AGAP2Q99490 1192 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 EBF4Q9BQW3 602 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 KCNK4Q9NYG8 393 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 TSC2P49815 1807 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 GYG2O15488 501 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 POLBP06746 335 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 ESRRAP11474 423 aaPredicted RBP17.8■□□□□ 0.44
LRFN3-201ENST00000246529 TPH1P17752 444 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 BDNFP23560 247 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 ZNF157P51786 506 aaPredicted RBP17.8■□□□□ 0.44
LRFN3-201ENST00000246529 CERCAMQ5T4B2 595 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 C17orf99Q6UX52 265 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 DNAAF3Q8N9W5 541 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 GIMAP7Q8NHV1 300 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 FBXO27Q8NI29 283 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 N4BP2L2Q92802 583 aaPredicted RBP17.8■□□□□ 0.44
LRFN3-201ENST00000246529 ZNF669Q96BR6 464 aaPredicted RBP17.8■□□□□ 0.44
LRFN3-201ENST00000246529 CERS2Q96G23 380 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 NUDCD1Q96RS6 583 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 TMEM209Q96SK2 561 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 SLC9A7Q96T83 725 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 APBA2Q99767 749 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 MLPHQ9BV36 600 aaPredicted RBP17.8■□□□□ 0.44
LRFN3-201ENST00000246529 WDCPQ9H6R7 721 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 RNPEPL1Q9HAU8 725 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 TMLHEQ9NVH6 421 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 Q9Y3F1 56 aa17.8■□□□□ 0.44
LRFN3-201ENST00000246529 CCDC78A2IDD5 438 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 TNPO2O14787 897 aaKnown RBP17.79■□□□□ 0.44
LRFN3-201ENST00000246529 GSC2O15499 205 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 PRKCGP05129 697 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 SCAPQ12770 1279 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 IRF5Q13568 498 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 MBLAC2Q68D91 279 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 TMEM86AQ8N2M4 240 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 ZNF778Q96MU6 729 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 PRDM16Q9HAZ2 1276 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 TAS2R1Q9NYW7 299 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 OR12D3Q9UGF7 316 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 CDH9Q9ULB4 789 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 C9IYK1 514 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 F8W810 466 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 BIRC5O15392 142 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 ATP9BO43861 1147 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 MGEA5O60502 916 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 LRIG2O94898 1065 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 ENO1P06733 434 aaKnown RBP17.79■□□□□ 0.44
LRFN3-201ENST00000246529 FGF3P11487 239 aaPredicted RBP17.79■□□□□ 0.44
LRFN3-201ENST00000246529 AKR1A1P14550 325 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 ALDH18A1P54886 795 aaKnown RBP17.79■□□□□ 0.44
LRFN3-201ENST00000246529 GJA9P57773 515 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 PPIDQ08752 370 aaKnown RBP17.79■□□□□ 0.44
LRFN3-201ENST00000246529 UPP1Q16831 310 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 TAC4Q86UU9 113 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.79■□□□□ 0.44
LRFN3-201ENST00000246529 MFSD3Q96ES6 412 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 ZNF570Q96NI8 536 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 SENP6Q9GZR1 1112 aaPredicted RBP17.79■□□□□ 0.44
LRFN3-201ENST00000246529 TMEM216Q9P0N5 145 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 VANGL2Q9ULK5 521 aa17.79■□□□□ 0.44
LRFN3-201ENST00000246529 PLIN3O60664 434 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 AP2A1O95782 977 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 NFKB1P19838 968 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 CALB2P22676 271 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 RCN2Q14257 317 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 KRT72Q14CN4 511 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 KYAT3Q6YP21 454 aaKnown RBP17.78■□□□□ 0.44
LRFN3-201ENST00000246529 RASAL3Q86YV0 1011 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 CCNJLQ8IV13 435 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 C10orf107Q8IVU9 208 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 KIRREL3Q8IZU9 778 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 GPATCH11Q8N954 259 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 USP33Q8TEY7 942 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 SMARCD1Q96GM5 515 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 TXNDC16Q9P2K2 825 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 BPTFQ12830 3046 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 B3GAT3O94766 335 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 FAM163BP0C2L3 166 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 SRGAP2BP0DMP2 458 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 TYK2P29597 1187 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 CD52P31358 61 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 PCLAFQ15004 111 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 C4orf50Q6ZRC1 276 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 SCAMP5Q8TAC9 235 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 RNF34Q969K3 372 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 RILPQ96NA2 401 aa17.78■□□□□ 0.44
LRFN3-201ENST00000246529 MTG1Q9BT17 334 aaPredicted RBP17.78■□□□□ 0.44
LRFN3-201ENST00000246529 GOLGA8TH3BQL2 631 aa17.77■□□□□ 0.44
LRFN3-201ENST00000246529 HNRNPCL1O60812 293 aaKnown RBP17.77■□□□□ 0.44
LRFN3-201ENST00000246529 GLRA3O75311 464 aa17.77■□□□□ 0.44
LRFN3-201ENST00000246529 IGHA2P01877 340 aa17.77■□□□□ 0.44
LRFN3-201ENST00000246529 TPBGLP0DKB5 382 aa17.77■□□□□ 0.44
LRFN3-201ENST00000246529 ARL13BQ3SXY8 428 aa17.77■□□□□ 0.44
LRFN3-201ENST00000246529 KHDC1Q4VXA5 237 aaKnown RBP17.77■□□□□ 0.44
LRFN3-201ENST00000246529 TEDDM1Q5T9Z0 273 aa17.77■□□□□ 0.44
LRFN3-201ENST00000246529 PDZD4Q76G19 769 aaPredicted RBP17.77■□□□□ 0.44
LRFN3-201ENST00000246529 DCLK2Q8N568 766 aa17.77■□□□□ 0.44
LRFN3-201ENST00000246529 NAT9Q9BTE0 207 aa17.77■□□□□ 0.44
LRFN3-201ENST00000246529 CAB39LQ9H9S4 337 aa17.77■□□□□ 0.44
LRFN3-201ENST00000246529 DNAJC16Q9Y2G8 782 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms