RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.96■□□□□ 0.63
HOXC11-201ENST00000243082 ALDH1A2O94788 518 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 MYCP01106 439 aaPredicted RBP18.96■□□□□ 0.63
HOXC11-201ENST00000243082 ZKSCAN8Q15776 578 aaPredicted RBP18.96■□□□□ 0.63
HOXC11-201ENST00000243082 PDK4Q16654 411 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 ZNF280DQ6N043 979 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 CGB2Q6NT52 195 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 APBB2Q92870 758 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 PAK6Q9NQU5 681 aaPredicted RBP18.96■□□□□ 0.63
HOXC11-201ENST00000243082 TRHDEQ9UKU6 1024 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 SUN1O94901 812 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 HTR7P34969 479 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 OLIG2Q13516 323 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 HHATQ5VTY9 493 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 KCTD11Q693B1 232 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 MSANTD2Q6P1R3 559 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 RSPO2Q6UXX9 243 aaPredicted RBP18.95■□□□□ 0.62
HOXC11-201ENST00000243082 ARHGAP12Q8IWW6 846 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 CCT6BQ92526 530 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 SERPINB11Q96P15 392 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 AGAP3Q96P47 875 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 GBA3Q9H227 469 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 C12orf65Q9H3J6 166 aaKnown RBP18.95■□□□□ 0.62
HOXC11-201ENST00000243082 SLC17A7Q9P2U7 560 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 USP15Q9Y4E8 981 aaPredicted RBP18.95■□□□□ 0.62
HOXC11-201ENST00000243082 TRIM49D1C9J1S8 452 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 NT5C1B-RDH14C9J2C7 533 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 TM9SF1O15321 606 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 TBC1D4O60343 1298 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 PQBP1O60828 265 aaKnown RBP18.95■□□□□ 0.62
HOXC11-201ENST00000243082 AP2A1O95782 977 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 SNRPAP09012 282 aaKnown RBP18.95■□□□□ 0.62
HOXC11-201ENST00000243082 PLXNA3P51805 1871 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 MTFR1Q15390 333 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 CASC4Q6P4E1 433 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 FUT10Q6P4F1 479 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 CCDC121Q6ZUS5 278 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 NPAS4Q8IUM7 802 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 UNC5BQ8IZJ1 945 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 GPR152Q8TDT2 470 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 SPOCK2Q92563 424 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 SCLYQ96I15 445 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 DEFB118Q96PH6 123 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 VAT1Q99536 393 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 SYBUQ9NX95 663 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 GMIPQ9P107 970 aa18.95■□□□□ 0.62
HOXC11-201ENST00000243082 FAM92AA1XBS5 289 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 CCT8L1PA6NM43 557 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 SOAT2O75908 522 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 KRT37O76014 449 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 VNN2O95498 520 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 GALTP07902 379 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 PYGBP11216 843 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 ADRA1DP25100 572 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 PBX3P40426 434 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 NEK3P51956 506 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 ARPP19P56211 112 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 ZNF33AQ06730 810 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 SPRED3Q2MJR0 410 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 ARHGAP36Q6ZRI8 547 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 TMEM173Q86WV6 379 aaPredicted RBP18.94■□□□□ 0.62
HOXC11-201ENST00000243082 CCNJLQ8IV13 435 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 C10orf67Q8IYJ2 551 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 ZNF276Q8N554 614 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 OR52K1Q8NGK4 314 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 TBC1D31Q96DN5 1066 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 SLC39A13Q96H72 371 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 TEKT5Q96M29 485 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 MLPHQ9BV36 600 aaPredicted RBP18.94■□□□□ 0.62
HOXC11-201ENST00000243082 SAGE1Q9NXZ1 904 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 HS3ST4Q9Y661 456 aa18.94■□□□□ 0.62
HOXC11-201ENST00000243082 HMX2A2RU54 273 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 FGF10O15520 208 aaPredicted RBP18.93■□□□□ 0.62
HOXC11-201ENST00000243082 JCHAINP01591 159 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 PGAM1P18669 254 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 NFKB1P19838 968 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 DNAJC3Q13217 504 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 RTP2Q5QGT7 225 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 FAM43BQ6ZT52 329 aaPredicted RBP18.93■□□□□ 0.62
HOXC11-201ENST00000243082 SPATA21Q7Z572 469 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 C14orf80Q86SX3 495 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 ARHGAP18Q8N392 663 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 TTC17Q96AE7 1141 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 APOPT1Q96IL0 206 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 TSGA13Q96PP4 275 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 PITPNM3Q9BZ71 974 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 CRISPLD1Q9H336 500 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 CATSPERBQ9H7T0 1116 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 TLR6Q9Y2C9 796 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 SLC27A5Q9Y2P5 690 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 MTMR11A4FU01 709 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 TBKBP1A7MCY6 615 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 HOXA2O43364 376 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 LPXNO60711 386 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 MOCS2O96007 188 aaPredicted RBP18.93■□□□□ 0.62
HOXC11-201ENST00000243082 MLLT6P55198 1093 aaPredicted RBP18.93■□□□□ 0.62
HOXC11-201ENST00000243082 COG7P83436 770 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 NRG1Q02297 640 aaPredicted RBP18.93■□□□□ 0.62
HOXC11-201ENST00000243082 GPR17Q13304 367 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 LGSNQ5TDP6 509 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms