RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 FYNP06241 537 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 MAPKAPK2P49137 400 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 BASP1P80723 227 aaKnown RBP11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 SULT2A1Q06520 285 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 CA9Q16790 459 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 MFSD6LQ8IWD5 586 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 SMRP1Q8NCR6 262 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 ACTL9Q8TC94 416 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 FRMD8P1Q9BZ68 369 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 BRD8Q9H0E9 1235 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 PRO3102Q9H379 93 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 ARGLU1Q9NWB6 273 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 ENDOD1O94919 500 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 CHRNA3P32297 505 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 YBEYP58557 167 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 TRIM68Q6AZZ1 485 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 LRRC49Q8IUZ0 686 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 SUSD6Q92537 303 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 ZSWIM3Q96MP5 696 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 LINC00597Q9H2U6 94 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 OBP2AQ9NY56 170 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 CLEC1BQ9P126 229 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 IPO11Q9UI26 975 aaKnown RBP11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 XPO7Q9UIA9 1087 aaKnown RBP11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 NDRG2Q9UN36 371 aaKnown RBP11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 RNASEH1O60930 286 aaKnown RBP11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 PRAMEF12O95522 483 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 PRLRP16471 622 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 RHOAP61586 193 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 DPYSL3Q14195 570 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 DHCR24Q15392 516 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 MARC1Q5VT66 337 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 RTL3Q8N8U3 475 aaKnown RBP11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 ATL2Q8NHH9 583 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 COG1Q8WTW3 980 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 CENPIQ92674 756 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 AZIN2Q96A70 460 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 ARHGEF38Q9NXL2 777 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 UBA2Q9UBT2 640 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 CCL26Q9Y258 94 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 CENPFP49454 3210 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 HTTP42858 3142 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 ZSCAN5CA6NGD5 496 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 RHOXF2BP0C7M4 288 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 PGFP49763 221 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 RENBPP51606 427 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 TRIP13Q15645 432 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 CCDC137Q6PK04 289 aaKnown RBP11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 SERPINA13PQ6UXR4 307 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 PPP1R21Q6ZMI0 780 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 CHST9Q7L1S5 443 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 IFT81Q8WYA0 676 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 IFT43Q96FT9 208 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 RHOXF2Q9BQY4 288 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 KLC2Q9H0B6 622 aa11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 MTRF1LQ9UGC7 380 aaKnown RBP11.42□□□□□ -0.58
TNFAIP3-201ENST00000237289 APOC4-APOC2K7ER74 178 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 APOC2P02655 101 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 ANKS1BQ7Z6G8 1248 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 CPNE8Q86YQ8 564 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 CHPFQ8IZ52 775 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 FSD1LQ9BXM9 530 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 ABCB8Q9NUT2 735 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 RASA4BC9J798 803 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 NEMP1O14524 444 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 RASA4O43374 803 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 TCF4P15884 667 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 DR1Q01658 176 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 SLC25A11Q02978 314 aaKnown RBP11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 GNA12Q03113 381 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 PARP15Q460N3 678 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 PARM1Q6UWI2 310 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 ALG3Q92685 438 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 KHSRPQ92945 711 aaKnown RBP eCLIP11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 MAGEH1Q9H213 219 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 KCND1Q9NSA2 647 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 NENFQ9UMX5 172 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 hCG_1818297A0A087WSY0 165 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 JCHAINP01591 159 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 ASGR2P07307 311 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 STIP1P31948 543 aaKnown RBP11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 TFF2Q03403 129 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 UBXN2BQ14CS0 331 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 PAPD7Q5XG87 772 aaKnown RBP11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 TXNRD3NBQ6F5E7 133 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 LEKR1Q6ZMV7 388 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 NYAP1Q6ZVC0 841 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 DNAAF3Q8N9W5 541 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 WFIKKN2Q8TEU8 576 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 DDX47Q9H0S4 455 aaKnown RBP11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 ECT2Q9H8V3 914 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 RSPH14Q9UHP6 348 aa11.41□□□□□ -0.58
TNFAIP3-201ENST00000237289 CHADO15335 359 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 ERLIN1O75477 346 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 CD48P09326 243 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 PABPC1P11940 636 aaKnown RBP11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 POU3F3P20264 500 aaPredicted RBP11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 HCAR3P49019 387 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 C2orf54Q08AI8 447 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 CCDC15Q0P6D6 951 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms