RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 CCDC33Q8N5R6 958 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 ACTRT2Q8TDY3 377 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 BCO2Q9BYV7 579 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 ZC3H7BQ9UGR2 993 aaKnown RBP21.1■□□□□ 0.97
SNX3-201ENST00000230085 USP18Q9UMW8 372 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 A0A0U1RQF3 1178 aa21.09■□□□□ 0.97
SNX3-201ENST00000230085 C2orf71A6NGG8 1288 aa21.09■□□□□ 0.97
SNX3-201ENST00000230085 CD48P09326 243 aa21.09■□□□□ 0.97
SNX3-201ENST00000230085 ACAT1P24752 427 aaKnown RBP21.09■□□□□ 0.97
SNX3-201ENST00000230085 BMP8BP34820 402 aa21.09■□□□□ 0.97
SNX3-201ENST00000230085 MYL6P60660 151 aa21.09■□□□□ 0.97
SNX3-201ENST00000230085 STX3Q13277 289 aa21.09■□□□□ 0.97
SNX3-201ENST00000230085 PDK2Q15119 407 aa21.09■□□□□ 0.97
SNX3-201ENST00000230085 CYP4V2Q6ZWL3 525 aaPredicted RBP21.09■□□□□ 0.97
SNX3-201ENST00000230085 ARHGAP22Q7Z5H3 698 aa21.09■□□□□ 0.97
SNX3-201ENST00000230085 ZBTB33Q86T24 672 aa21.09■□□□□ 0.97
SNX3-201ENST00000230085 CAND1Q86VP6 1230 aaKnown RBP21.09■□□□□ 0.97
SNX3-201ENST00000230085 WDR75Q8IWA0 830 aaKnown RBP21.09■□□□□ 0.97
SNX3-201ENST00000230085 FAF2Q96CS3 445 aa21.09■□□□□ 0.97
SNX3-201ENST00000230085 TCHPQ9BT92 498 aa21.09■□□□□ 0.97
SNX3-201ENST00000230085 FAM105AQ9NUU6 356 aa21.09■□□□□ 0.97
SNX3-201ENST00000230085 DNAJC28Q9NX36 388 aa21.09■□□□□ 0.97
SNX3-201ENST00000230085 PRR5-ARHGAP8B1AHC4 643 aa21.08■□□□□ 0.97
SNX3-201ENST00000230085 RNASEH1O60930 286 aaKnown RBP21.08■□□□□ 0.97
SNX3-201ENST00000230085 EFCAB14O75071 495 aa21.08■□□□□ 0.97
SNX3-201ENST00000230085 TOM1L1O75674 476 aa21.08■□□□□ 0.97
SNX3-201ENST00000230085 PIAS1O75925 651 aa21.08■□□□□ 0.97
SNX3-201ENST00000230085 PROZP22891 400 aa21.08■□□□□ 0.97
SNX3-201ENST00000230085 ZNF143P52747 638 aaPredicted RBP21.08■□□□□ 0.97
SNX3-201ENST00000230085 PSMC1P62191 440 aaKnown RBP21.08■□□□□ 0.97
SNX3-201ENST00000230085 ARHGAP8P85298 464 aa21.08■□□□□ 0.97
SNX3-201ENST00000230085 NAB1Q13506 487 aa21.08■□□□□ 0.97
SNX3-201ENST00000230085 SMTNL2Q2TAL5 461 aa21.08■□□□□ 0.97
SNX3-201ENST00000230085 DARS2Q6PI48 645 aaKnown RBP21.08■□□□□ 0.97
SNX3-201ENST00000230085 PPM1NQ8N819 430 aa21.08■□□□□ 0.97
SNX3-201ENST00000230085 GSDMBQ8TAX9 411 aa21.08■□□□□ 0.97
SNX3-201ENST00000230085 RNF217Q8TC41 542 aa21.08■□□□□ 0.97
SNX3-201ENST00000230085 PIWIL2Q8TC59 973 aaKnown RBP21.08■□□□□ 0.97
SNX3-201ENST00000230085 KLC2Q9H0B6 622 aa21.08■□□□□ 0.97
SNX3-201ENST00000230085 HES2Q9Y543 173 aa21.08■□□□□ 0.97
SNX3-201ENST00000230085 GSRP00390 522 aa21.08■□□□□ 0.96
SNX3-201ENST00000230085 UBTFL6P0CB48 400 aaPredicted RBP21.08■□□□□ 0.96
SNX3-201ENST00000230085 FAM189BP81408 668 aa21.08■□□□□ 0.96
SNX3-201ENST00000230085 LAMB3Q13751 1172 aa21.08■□□□□ 0.96
SNX3-201ENST00000230085 RASIP1Q5U651 963 aa21.08■□□□□ 0.96
SNX3-201ENST00000230085 STEAP4Q687X5 459 aa21.08■□□□□ 0.96
SNX3-201ENST00000230085 STON2Q8WXE9 905 aa21.08■□□□□ 0.96
SNX3-201ENST00000230085 RNF157Q96PX1 679 aa21.08■□□□□ 0.96
SNX3-201ENST00000230085 ADPGKQ9BRR6 497 aa21.08■□□□□ 0.96
SNX3-201ENST00000230085 CNPY3Q9BT09 278 aa21.08■□□□□ 0.96
SNX3-201ENST00000230085 NRDE2Q9H7Z3 1164 aa21.08■□□□□ 0.96
SNX3-201ENST00000230085 C10orf88Q9H8K7 445 aa21.08■□□□□ 0.96
SNX3-201ENST00000230085 XAB2Q9HCS7 855 aaKnown RBP21.08■□□□□ 0.96
SNX3-201ENST00000230085 CYTH4Q9UIA0 394 aa21.08■□□□□ 0.96
SNX3-201ENST00000230085 CPSF3Q9UKF6 684 aaKnown RBP21.08■□□□□ 0.96
SNX3-201ENST00000230085 TMCO1Q9UM00 188 aa21.08■□□□□ 0.96
SNX3-201ENST00000230085 HMX2A2RU54 273 aa21.07■□□□□ 0.96
SNX3-201ENST00000230085 OGTO15294 1046 aa21.07■□□□□ 0.96
SNX3-201ENST00000230085 ALDH1A2O94788 518 aa21.07■□□□□ 0.96
SNX3-201ENST00000230085 CCDC130P13994 396 aa21.07■□□□□ 0.96
SNX3-201ENST00000230085 CPA2P48052 419 aa21.07■□□□□ 0.96
SNX3-201ENST00000230085 MED21Q13503 144 aa21.07■□□□□ 0.96
SNX3-201ENST00000230085 PABPC1LQ4VXU2 614 aaKnown RBP21.07■□□□□ 0.96
SNX3-201ENST00000230085 KCNT1Q5JUK3 1230 aa21.07■□□□□ 0.96
SNX3-201ENST00000230085 MPZL3Q6UWV2 235 aa21.07■□□□□ 0.96
SNX3-201ENST00000230085 FAM43BQ6ZT52 329 aaPredicted RBP21.07■□□□□ 0.96
SNX3-201ENST00000230085 CRIPAKQ8N1N5 446 aa21.07■□□□□ 0.96
SNX3-201ENST00000230085 SMG8Q8ND04 991 aaKnown RBP21.07■□□□□ 0.96
SNX3-201ENST00000230085 KLHL4Q9C0H6 718 aa21.07■□□□□ 0.96
SNX3-201ENST00000230085 CDT1Q9H211 546 aa21.07■□□□□ 0.96
SNX3-201ENST00000230085 PRO3102Q9H379 93 aa21.07■□□□□ 0.96
SNX3-201ENST00000230085 MEIS3P2A8K0S8 358 aa21.06■□□□□ 0.96
SNX3-201ENST00000230085 CXorf49A8MYA2 514 aaPredicted RBP21.06■□□□□ 0.96
SNX3-201ENST00000230085 AMHP03971 560 aa21.06■□□□□ 0.96
SNX3-201ENST00000230085 HARSP12081 509 aaKnown RBP21.06■□□□□ 0.96
SNX3-201ENST00000230085 GRK2P25098 689 aa21.06■□□□□ 0.96
SNX3-201ENST00000230085 KDSRQ06136 332 aa21.06■□□□□ 0.96
SNX3-201ENST00000230085 INSCQ1MX18 579 aa21.06■□□□□ 0.96
SNX3-201ENST00000230085 MBLAC2Q68D91 279 aa21.06■□□□□ 0.96
SNX3-201ENST00000230085 SLC9A4Q6AI14 798 aa21.06■□□□□ 0.96
SNX3-201ENST00000230085 RNF169Q8NCN4 708 aa21.06■□□□□ 0.96
SNX3-201ENST00000230085 TOP1MTQ969P6 601 aa21.06■□□□□ 0.96
SNX3-201ENST00000230085 SIGLEC10Q96LC7 697 aa21.06■□□□□ 0.96
SNX3-201ENST00000230085 EPAS1Q99814 870 aa21.06■□□□□ 0.96
SNX3-201ENST00000230085 EBNA1BP2Q99848 306 aaKnown RBP21.06■□□□□ 0.96
SNX3-201ENST00000230085 MECRQ9BV79 373 aa21.06■□□□□ 0.96
SNX3-201ENST00000230085 NXF3Q9H4D5 531 aaKnown RBP21.06■□□□□ 0.96
SNX3-201ENST00000230085 SMYD2Q9NRG4 433 aa21.06■□□□□ 0.96
SNX3-201ENST00000230085 PLK2Q9NYY3 685 aa21.06■□□□□ 0.96
SNX3-201ENST00000230085 MOCS1Q9NZB8 636 aa21.06■□□□□ 0.96
SNX3-201ENST00000230085 IPPQ9Y573 584 aa21.06■□□□□ 0.96
SNX3-201ENST00000230085 PTPRSQ13332 1948 aa21.06■□□□□ 0.96
SNX3-201ENST00000230085 DPYSL4O14531 572 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 CREB5Q02930 508 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 ZNF699Q32M78 642 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 FAM117BQ6P1L5 589 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 UNC5AQ6ZN44 842 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 MAP7D3Q8IWC1 876 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 EZH1Q92800 747 aaPredicted RBP21.05■□□□□ 0.96
SNX3-201ENST00000230085 LPPQ93052 612 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms