RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 SPOCK2Q92563 424 aa17.3■□□□□ 0.36
GAPDH-201ENST00000229239 TRIM43Q96BQ3 446 aaPredicted RBP17.3■□□□□ 0.36
GAPDH-201ENST00000229239 RMDN2Q96LZ7 410 aa17.3■□□□□ 0.36
GAPDH-201ENST00000229239 SMYD2Q9NRG4 433 aa17.3■□□□□ 0.36
GAPDH-201ENST00000229239 LTBP2Q14767 1821 aa17.3■□□□□ 0.36
GAPDH-201ENST00000229239 LAMA3Q16787 3333 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 A0A1W2PPC1 479 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 PSMD3O43242 534 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 HNRNPCL1O60812 293 aaKnown RBP17.29■□□□□ 0.36
GAPDH-201ENST00000229239 BDNFP23560 247 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 BRCC3P46736 316 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 MGAT5Q09328 741 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 SF3A3Q12874 501 aaKnown RBP eCLIP17.29■□□□□ 0.369e-7■■■■□ 21.8
GAPDH-201ENST00000229239 BRMS1LQ5PSV4 323 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 CYB5D1Q6P9G0 228 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 OTOAQ7RTW8 1153 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 PID1Q7Z2X4 250 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 CCDC33Q8N5R6 958 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 LRRC37BQ96QE4 947 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 KLF6Q99612 283 aaPredicted RBP17.29■□□□□ 0.36
GAPDH-201ENST00000229239 TUBB6Q9BUF5 446 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 UBE2OQ9C0C9 1292 aaKnown RBP17.29■□□□□ 0.36
GAPDH-201ENST00000229239 SLCO1B3Q9NPD5 702 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 RGS18Q9NS28 235 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 TMEM39AQ9NV64 488 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 KLHL8Q9P2G9 620 aaPredicted RBP17.29■□□□□ 0.36
GAPDH-201ENST00000229239 FAM72CH0Y354 149 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 TMEM189-UBE2V1I3L0A0 370 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 C2CD2LO14523 706 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 RFPL1O75677 317 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 IGLV3-25P01717 112 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 CSH1P0DML2 217 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 CSH2P0DML3 217 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 CCNB1P14635 433 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 PTPN3P26045 913 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 PSMB4P28070 264 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 RASSF2P50749 326 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 RIPK1Q13546 671 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 FAM72AQ5TYM5 149 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 FAM72DQ6L9T8 149 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 FAM72BQ86X60 149 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 MAGEC3Q8TD91 643 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 C10orf82Q8WW14 230 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 OXNAD1Q96HP4 312 aaPredicted RBP17.29■□□□□ 0.36
GAPDH-201ENST00000229239 PPP1R2P1Q96PQ5 205 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 SRPK1Q96SB4 655 aaKnown RBP17.29■□□□□ 0.36
GAPDH-201ENST00000229239 TRIM55Q9BYV6 548 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 TKTL2Q9H0I9 626 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 ECT2Q9H8V3 914 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 OR12D3Q9UGF7 316 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 PLLPQ9Y342 182 aa17.29■□□□□ 0.36
GAPDH-201ENST00000229239 MAGEB16A2A368 324 aa17.28■□□□□ 0.36
GAPDH-201ENST00000229239 WDR27A2RRH5 827 aa17.28■□□□□ 0.36
GAPDH-201ENST00000229239 AP2A1O95782 977 aa17.28■□□□□ 0.36
GAPDH-201ENST00000229239 CRHR1P34998 444 aa17.28■□□□□ 0.36
GAPDH-201ENST00000229239 GRIA1P42261 906 aa17.28■□□□□ 0.36
GAPDH-201ENST00000229239 NCALDP61601 193 aa17.28■□□□□ 0.36
GAPDH-201ENST00000229239 NIPAL4Q0D2K0 466 aa17.28■□□□□ 0.36
GAPDH-201ENST00000229239 EIF4EBP2Q13542 120 aaPredicted RBP17.28■□□□□ 0.36
GAPDH-201ENST00000229239 SPANXN3Q5MJ09 141 aa17.28■□□□□ 0.36
GAPDH-201ENST00000229239 ATG16L1Q676U5 607 aa17.28■□□□□ 0.36
GAPDH-201ENST00000229239 SLC43A3Q8NBI5 491 aa17.28■□□□□ 0.36
GAPDH-201ENST00000229239 ADAM32Q8TC27 787 aa17.28■□□□□ 0.36
GAPDH-201ENST00000229239 FAM111AQ96PZ2 611 aa17.28■□□□□ 0.36
GAPDH-201ENST00000229239 SEZ6LQ9BYH1 1024 aa17.28■□□□□ 0.36
GAPDH-201ENST00000229239 ANLNQ9NQW6 1124 aa17.28■□□□□ 0.36
GAPDH-201ENST00000229239 ABCC13Q9NSE7 274 aa17.28■□□□□ 0.36
GAPDH-201ENST00000229239 ARHGEF38Q9NXL2 777 aa17.28■□□□□ 0.36
GAPDH-201ENST00000229239 SEPT10Q9P0V9 454 aa17.28■□□□□ 0.36
GAPDH-201ENST00000229239 I6L893 689 aaPredicted RBP17.27■□□□□ 0.36
GAPDH-201ENST00000229239 KIAA0355O15063 1070 aa17.27■□□□□ 0.36
GAPDH-201ENST00000229239 BIRC5O15392 142 aa17.27■□□□□ 0.36
GAPDH-201ENST00000229239 MGRN1O60291 552 aa17.27■□□□□ 0.36
GAPDH-201ENST00000229239 POLBP06746 335 aa17.27■□□□□ 0.36
GAPDH-201ENST00000229239 GARSP41250 739 aaKnown RBP17.27■□□□□ 0.36
GAPDH-201ENST00000229239 SERPINB4P48594 390 aa17.27■□□□□ 0.36
GAPDH-201ENST00000229239 CDK18Q07002 472 aa17.27■□□□□ 0.36
GAPDH-201ENST00000229239 CASC4Q6P4E1 433 aa17.27■□□□□ 0.36
GAPDH-201ENST00000229239 TRMT10BQ6PF06 316 aaKnown RBP17.27■□□□□ 0.36
GAPDH-201ENST00000229239 GLB1LQ6UWU2 654 aa17.27■□□□□ 0.36
GAPDH-201ENST00000229239 TAC4Q86UU9 113 aa17.27■□□□□ 0.36
GAPDH-201ENST00000229239 SPATA2LQ8IUW3 424 aaPredicted RBP17.27■□□□□ 0.36
GAPDH-201ENST00000229239 PARP9Q8IXQ6 854 aa17.27■□□□□ 0.36
GAPDH-201ENST00000229239 OR10T2Q8NGX3 314 aa17.27■□□□□ 0.36
GAPDH-201ENST00000229239 DQX1Q8TE96 717 aaKnown RBP17.27■□□□□ 0.36
GAPDH-201ENST00000229239 ARNTL2Q8WYA1 636 aa17.27■□□□□ 0.36
GAPDH-201ENST00000229239 EDEM1Q92611 657 aa17.27■□□□□ 0.36
GAPDH-201ENST00000229239 HAPLN3Q96S86 360 aa17.27■□□□□ 0.36
GAPDH-201ENST00000229239 TSSK1BQ9BXA7 367 aa17.27■□□□□ 0.36
GAPDH-201ENST00000229239 GBA3Q9H227 469 aa17.27■□□□□ 0.36
GAPDH-201ENST00000229239 INPP5FQ9Y2H2 1132 aa17.27■□□□□ 0.36
GAPDH-201ENST00000229239 I3L4J1 428 aa17.27■□□□□ 0.35
GAPDH-201ENST00000229239 UNC5CO95185 931 aa17.27■□□□□ 0.35
GAPDH-201ENST00000229239 NEFHP12036 1026 aa17.27■□□□□ 0.35
GAPDH-201ENST00000229239 RAG1P15918 1043 aa17.27■□□□□ 0.35
GAPDH-201ENST00000229239 MGAT1P26572 445 aa17.27■□□□□ 0.35
GAPDH-201ENST00000229239 EPHB2P29323 1055 aa17.27■□□□□ 0.35
GAPDH-201ENST00000229239 YWHAHQ04917 246 aaPredicted RBP17.27■□□□□ 0.35
GAPDH-201ENST00000229239 KYAT3Q6YP21 454 aaKnown RBP17.27■□□□□ 0.35
GAPDH-201ENST00000229239 CCDC91Q7Z6B0 441 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms