RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 OOSP2Q86WS3 158 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 PRELID2Q8N945 189 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 JADE3Q92613 823 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 ZNF75CPQ92670 426 aaPredicted RBP11.75□□□□□ -0.53
NOD1-201ENST00000222823 SYNDIG1Q9H7V2 258 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 RGS18Q9NS28 235 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 LNPEPQ9UIQ6 1025 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 ZNF711Q9Y462 761 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 PCDHB12Q9Y5F1 795 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 MAGEA13PA6NCF6 341 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 MGAT4DA6NG13 374 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 GOLGA8TH3BQL2 631 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 GPC1P35052 558 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 HALP42357 657 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 NOVP48745 357 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 NEK2P51955 445 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 ANKS6Q68DC2 871 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 CNBD2Q96M20 576 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 CPNE1Q99829 537 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 CXorf56Q9H5V9 222 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 USP1O94782 785 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 LYPLA2O95372 231 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 HNRNPCP07910 306 aaKnown RBP eCLIP11.75□□□□□ -0.53
NOD1-201ENST00000222823 CRABP2P29373 138 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 TUFMP49411 452 aaKnown RBP11.75□□□□□ -0.53
NOD1-201ENST00000222823 SCNN1GP51170 649 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 ZNF143P52747 638 aaPredicted RBP11.75□□□□□ -0.53
NOD1-201ENST00000222823 SPIRE1Q08AE8 756 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 BTG3Q14201 252 aaPredicted RBP11.75□□□□□ -0.53
NOD1-201ENST00000222823 SLC39A12Q504Y0 691 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 PIGZQ86VD9 579 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 TRIM48Q8IWZ4 208 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 ACOX2Q99424 681 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 SH3GL1Q99961 368 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 PDP2Q9P2J9 529 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 OR12D3Q9UGF7 316 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 SPATA31C2B4DYI2 1134 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 TRUB2O95900 331 aaKnown RBP11.74□□□□□ -0.53
NOD1-201ENST00000222823 KRT6AP02538 564 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 KRT6BP04259 564 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 NUDT17P0C025 328 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 RAG1P15918 1043 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 KRT6CP48668 564 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 PCYT1AP49585 367 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 PARP6Q2NL67 630 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 SLC45A4Q5BKX6 768 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 LENG9Q96B70 501 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 CENPTQ96BT3 561 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 PARVBQ9HBI1 364 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 HPS4Q9NQG7 708 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 GNG14A0A1W2PPG7 69 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 RNASEH1O60930 286 aaKnown RBP11.74□□□□□ -0.53
NOD1-201ENST00000222823 DAB1O75553 588 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 RTN3O95197 1032 aaPredicted RBP11.74□□□□□ -0.53
NOD1-201ENST00000222823 ZCCHC18P0CG32 403 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 ZNF7P17097 686 aaPredicted RBP11.74□□□□□ -0.53
NOD1-201ENST00000222823 MARCKSL1P49006 195 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 RTP1P59025 263 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 CSTF3Q12996 717 aaKnown RBP11.74□□□□□ -0.53
NOD1-201ENST00000222823 LGI2Q8N0V4 545 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 FBXO39Q8N4B4 442 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 ACO2Q99798 780 aaKnown RBP11.74□□□□□ -0.53
NOD1-201ENST00000222823 IKZF4Q9H2S9 585 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 RRAGCQ9HB90 399 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 MARCH2Q9P0N8 246 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 POLG2Q9UHN1 485 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 MRPL42Q9Y6G3 142 aaKnown RBP11.74□□□□□ -0.53
NOD1-201ENST00000222823 PAPPAQ13219 1627 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 ASTN2O75129 1339 aaPredicted RBP11.74□□□□□ -0.53
NOD1-201ENST00000222823 MYPNQ86TC9 1320 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 EFCAB14O75071 495 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 FSBPO95073 299 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 NPR3P17342 541 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 TBL3Q12788 808 aaKnown RBP11.74□□□□□ -0.53
NOD1-201ENST00000222823 CNTN1Q12860 1018 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 DEPDC1Q5TB30 811 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 ZBTB49Q6ZSB9 765 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 PLPPR4Q7Z2D5 763 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 B3GALNT2Q8NCR0 500 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 PPP1R10Q96QC0 940 aaKnown RBP11.74□□□□□ -0.53
NOD1-201ENST00000222823 MRPL9Q9BYD2 267 aaKnown RBP11.74□□□□□ -0.53
NOD1-201ENST00000222823 SIX2Q9NPC8 291 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 TUBGCP4Q9UGJ1 667 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 TNFSF9P41273 254 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 SKIV2L2P42285 1042 aaKnown RBP11.74□□□□□ -0.53
NOD1-201ENST00000222823 CDK7P50613 346 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 PRKAA2P54646 552 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 RPL7AP62424 266 aaKnown RBP11.74□□□□□ -0.53
NOD1-201ENST00000222823 NOMO3P69849 1222 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 EEF1DP3Q658K8 133 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 NEPROQ6NW34 567 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 ERAP2Q6P179 960 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 ZCCHC23Q6ZST2 131 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 LRRC8DQ7L1W4 858 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 PACS2Q86VP3 889 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 ALG3Q92685 438 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 CATSPER2Q96P56 530 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 WDR41Q9HAD4 459 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 NMRAL1Q9HBL8 299 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 DDX28Q9NUL7 540 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms