RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 ICA1LQ8NDH6 482 aa13.9□□□□□ -0.19
RAB3D-201ENST00000222120 OLIG1Q8TAK6 271 aa13.9□□□□□ -0.19
RAB3D-201ENST00000222120 ARHGEF3Q9NR81 526 aa13.9□□□□□ -0.19
RAB3D-201ENST00000222120 KCNK4Q9NYG8 393 aa13.9□□□□□ -0.19
RAB3D-201ENST00000222120 SOX13Q9UN79 622 aa13.9□□□□□ -0.19
RAB3D-201ENST00000222120 ACOT9Q9Y305 439 aa13.9□□□□□ -0.19
RAB3D-201ENST00000222120 NRAPQ86VF7 1730 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 CITO14578 2027 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 GSC2O15499 205 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 MTSS1O43312 755 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 LHX1P48742 406 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 LILRA4P59901 499 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 OVOS1Q6IE37 1185 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 MIPOL1Q8TD10 442 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 ARHGAP26Q9UNA1 814 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 COL2A1P02458 1487 aaPredicted RBP13.89□□□□□ -0.19
RAB3D-201ENST00000222120 TIMM44O43615 452 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 TSPAN3O60637 253 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 SUPT7LO94864 414 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 GMPRP36959 345 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 PITX1P78337 314 aaPredicted RBP13.89□□□□□ -0.19
RAB3D-201ENST00000222120 DLG2Q15700 870 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 SLC25A52Q3SY17 297 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 C10orf120Q5SQS8 335 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 LRRC74BQ6ZQY2 392 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 PSTKQ8IV42 348 aaKnown RBP13.89□□□□□ -0.19
RAB3D-201ENST00000222120 EFHBQ8N7U6 833 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 RPRD1AQ96P16 312 aaPredicted RBP13.89□□□□□ -0.19
RAB3D-201ENST00000222120 NMRAL1Q9HBL8 299 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 VCX3AQ9NNX9 186 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 COL5A3P25940 1745 aaPredicted RBP13.89□□□□□ -0.19
RAB3D-201ENST00000222120 NHSQ6T4R5 1651 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 MYBPHLA2RUH7 354 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 TRIM13O60858 407 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 STMN1P16949 149 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 GRK2P25098 689 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 L1CAMP32004 1257 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 SLC34A1Q06495 639 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 ZNF470Q6ECI4 717 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 GLB1LQ6UWU2 654 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 SLC26A9Q7LBE3 791 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 ST13P4Q8IZP2 240 aaPredicted RBP13.89□□□□□ -0.19
RAB3D-201ENST00000222120 TEKT4Q8WW24 435 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 EBF4Q9BQW3 602 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 DUSP16Q9BY84 665 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 CATSPERBQ9H7T0 1116 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 TCF7L2Q9NQB0 619 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 CHRAC1Q9NRG0 131 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 PLA2G4CQ9UP65 541 aa13.89□□□□□ -0.19
RAB3D-201ENST00000222120 ARHGEF37A1IGU5 675 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 BCLAF3A2AJT9 711 aaKnown RBP13.88□□□□□ -0.19
RAB3D-201ENST00000222120 SPTLC1O15269 473 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 PFDN1O60925 122 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 ENDOD1O94919 500 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 PSMG1O95456 288 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 BPGMP07738 259 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 CNTFP26441 200 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 ADRA1BP35368 520 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 TUBP50607 506 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 MED21Q13503 144 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 SEL1L3Q68CR1 1132 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 KRT80Q6KB66 452 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 LRRC8EQ6NSJ5 796 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 CHSY1Q86X52 802 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 DDX50Q9BQ39 737 aaKnown RBP13.88□□□□□ -0.19
RAB3D-201ENST00000222120 PHACTR1Q9C0D0 580 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 ANLNQ9NQW6 1124 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 SFMBT1Q9UHJ3 866 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 ST3GAL5Q9UNP4 418 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 CDYLQ9Y232 598 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 MYH9P35579 1960 aaKnown RBP13.88□□□□□ -0.19
RAB3D-201ENST00000222120 IGKV6D-21A0A0A0MT36 114 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 ZBTB24O43167 697 aaPredicted RBP13.88□□□□□ -0.19
RAB3D-201ENST00000222120 RANBP1P43487 201 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 GSCP56915 257 aaPredicted RBP13.88□□□□□ -0.19
RAB3D-201ENST00000222120 GHRHRQ02643 423 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 CYTH1Q15438 398 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.88□□□□□ -0.19
RAB3D-201ENST00000222120 OLFML1Q6UWY5 402 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 RINLQ6ZS11 566 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 CDHR3Q6ZTQ4 885 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 PQLC3Q8N755 202 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 RBM15BQ8NDT2 890 aaKnown RBP13.88□□□□□ -0.19
RAB3D-201ENST00000222120 FGD4Q96M96 766 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 YJEFN3A6XGL0 299 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 E7ENQ6 273 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 PKNOX1P55347 436 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 TBL3Q12788 808 aaKnown RBP13.88□□□□□ -0.19
RAB3D-201ENST00000222120 CDH17Q12864 832 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 CNGA3Q16281 694 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 KYAT3Q6YP21 454 aaKnown RBP13.88□□□□□ -0.19
RAB3D-201ENST00000222120 HFE2Q6ZVN8 426 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 OTOP3Q7RTS5 596 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 MAML3Q96JK9 1138 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 CADM1Q9BY67 442 aaKnown RBP13.88□□□□□ -0.19
RAB3D-201ENST00000222120 SUDS3Q9H7L9 328 aaPredicted RBP13.88□□□□□ -0.19
RAB3D-201ENST00000222120 SNX15Q9NRS6 342 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 NKX1-2Q9UD57 310 aaPredicted RBP13.88□□□□□ -0.19
RAB3D-201ENST00000222120 CDK5RAP2Q96SN8 1893 aa13.88□□□□□ -0.19
RAB3D-201ENST00000222120 USP1O94782 785 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms