RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 RNF135Q8IUD6 432 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 WFDC5Q8TCV5 224 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 RNF157Q96PX1 679 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 HEMGNQ9BXL5 484 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 MAK16Q9BXY0 300 aaKnown RBP28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 ETNK2Q9NVF9 386 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 TICRRQ7Z2Z1 1910 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 MYOFQ9NZM1 2061 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 hCG_1818297A0A087WSY0 165 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 H0Y626 953 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 CASQ1P31415 396 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 DYNLT1P63172 113 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 GAB4Q2WGN9 574 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 SEL1L2Q5TEA6 688 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 C12orf40Q86WS4 652 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 VSIG1Q86XK7 387 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 RTL3Q8N8U3 475 aaKnown RBP28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 TRAF3IP1Q8TDR0 691 aaPredicted RBP28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 CARD9Q9H257 536 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 NDFIP2Q9NV92 336 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 TMEM248Q9NWD8 314 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 ZNF212Q9UDV6 495 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 MYO10Q9HD67 2058 aa28.03■■■□□ 2.08
CHMP4B-201ENST00000217402 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP28.02■■■□□ 2.08
CHMP4B-201ENST00000217402 ZNF487B1APH4 448 aa28.02■■■□□ 2.08
CHMP4B-201ENST00000217402 OR1E1P30953 314 aa28.02■■■□□ 2.08
CHMP4B-201ENST00000217402 GJA4P35212 333 aa28.02■■■□□ 2.08
CHMP4B-201ENST00000217402 CETN2P41208 172 aa28.02■■■□□ 2.08
CHMP4B-201ENST00000217402 COPS2P61201 443 aa28.02■■■□□ 2.08
CHMP4B-201ENST00000217402 ZNF177Q13360 481 aaPredicted RBP28.02■■■□□ 2.08
CHMP4B-201ENST00000217402 TAZQ16635 292 aa28.02■■■□□ 2.08
CHMP4B-201ENST00000217402 GJD3Q8N144 294 aa28.02■■■□□ 2.08
CHMP4B-201ENST00000217402 PQLC3Q8N755 202 aa28.02■■■□□ 2.08
CHMP4B-201ENST00000217402 DNASE1L2Q92874 299 aa28.02■■■□□ 2.08
CHMP4B-201ENST00000217402 OSBPL8Q9BZF1 889 aa28.02■■■□□ 2.08
CHMP4B-201ENST00000217402 SNX12Q9UMY4 172 aa28.02■■■□□ 2.08
CHMP4B-201ENST00000217402 DUSP12Q9UNI6 340 aa28.02■■■□□ 2.08
CHMP4B-201ENST00000217402 SORCS3Q9UPU3 1222 aa28.02■■■□□ 2.08
CHMP4B-201ENST00000217402 ESPNB1AK53 854 aa28.01■■■□□ 2.07
CHMP4B-201ENST00000217402 DCLK1O15075 740 aa28.01■■■□□ 2.07
CHMP4B-201ENST00000217402 CACNG3O60359 315 aa28.01■■■□□ 2.07
CHMP4B-201ENST00000217402 PPP2R5EQ16537 467 aa28.01■■■□□ 2.07
CHMP4B-201ENST00000217402 FSCBQ5H9T9 825 aa28.01■■■□□ 2.07
CHMP4B-201ENST00000217402 TJAP1Q5JTD0 557 aa28.01■■■□□ 2.07
CHMP4B-201ENST00000217402 TMCO3Q6UWJ1 677 aa28.01■■■□□ 2.07
CHMP4B-201ENST00000217402 CCDC117Q8IWD4 279 aaPredicted RBP28.01■■■□□ 2.07
CHMP4B-201ENST00000217402 XPO6Q96QU8 1125 aaKnown RBP28.01■■■□□ 2.07
CHMP4B-201ENST00000217402 OSBPL9Q96SU4 736 aa28.01■■■□□ 2.07
CHMP4B-201ENST00000217402 HERPUD2Q9BSE4 406 aa28.01■■■□□ 2.07
CHMP4B-201ENST00000217402 CD320Q9NPF0 282 aa28.01■■■□□ 2.07
CHMP4B-201ENST00000217402 HEBP1Q9NRV9 189 aa28.01■■■□□ 2.07
CHMP4B-201ENST00000217402 DNAJC17Q9NVM6 304 aaKnown RBP28.01■■■□□ 2.07
CHMP4B-201ENST00000217402 NUMBP49757 651 aa28■■■□□ 2.07
CHMP4B-201ENST00000217402 PFKPQ01813 784 aa28■■■□□ 2.07
CHMP4B-201ENST00000217402 ADCY2Q08462 1091 aa28■■■□□ 2.07
CHMP4B-201ENST00000217402 RNF43Q68DV7 783 aa28■■■□□ 2.07
CHMP4B-201ENST00000217402 NAIF1Q69YI7 327 aaPredicted RBP28■■■□□ 2.07
CHMP4B-201ENST00000217402 NETO2Q8NC67 525 aa28■■■□□ 2.07
CHMP4B-201ENST00000217402 TRPV5Q9NQA5 729 aa28■■■□□ 2.07
CHMP4B-201ENST00000217402 SLC2A4RGQ9NR83 387 aa28■■■□□ 2.07
CHMP4B-201ENST00000217402 WASH4PA8MWX3 477 aa28■■■□□ 2.07
CHMP4B-201ENST00000217402 TRIM24O15164 1050 aa28■■■□□ 2.07
CHMP4B-201ENST00000217402 CEP104O60308 925 aa28■■■□□ 2.07
CHMP4B-201ENST00000217402 MAPKAPK2P49137 400 aa28■■■□□ 2.07
CHMP4B-201ENST00000217402 NCBP2-AS2Q69YL0 99 aa28■■■□□ 2.07
CHMP4B-201ENST00000217402 CXorf57Q6NSI4 855 aaKnown RBP28■■■□□ 2.07
CHMP4B-201ENST00000217402 NPWQ8N729 165 aa28■■■□□ 2.07
CHMP4B-201ENST00000217402 OR52K2Q8NGK3 314 aa28■■■□□ 2.07
CHMP4B-201ENST00000217402 ZNF592Q92610 1267 aa28■■■□□ 2.07
CHMP4B-201ENST00000217402 CHFRQ96EP1 664 aa28■■■□□ 2.07
CHMP4B-201ENST00000217402 COL4A2P08572 1712 aa27.99■■■□□ 2.07
CHMP4B-201ENST00000217402 DOCK4Q8N1I0 1966 aa27.99■■■□□ 2.07
CHMP4B-201ENST00000217402 APOL1O14791 398 aa27.99■■■□□ 2.07
CHMP4B-201ENST00000217402 CST8O60676 142 aa27.99■■■□□ 2.07
CHMP4B-201ENST00000217402 TULP3O75386 442 aa27.99■■■□□ 2.07
CHMP4B-201ENST00000217402 RHOCP08134 193 aa27.99■■■□□ 2.07
CHMP4B-201ENST00000217402 PTPN7P35236 360 aa27.99■■■□□ 2.07
CHMP4B-201ENST00000217402 SLC6A11P48066 632 aa27.99■■■□□ 2.07
CHMP4B-201ENST00000217402 C6orf118Q5T5N4 469 aa27.99■■■□□ 2.07
CHMP4B-201ENST00000217402 IER5LQ5T953 404 aa27.99■■■□□ 2.07
CHMP4B-201ENST00000217402 PAPD7Q5XG87 772 aaKnown RBP27.99■■■□□ 2.07
CHMP4B-201ENST00000217402 ETFBKMTQ8IXQ9 262 aa27.99■■■□□ 2.07
CHMP4B-201ENST00000217402 COG1Q8WTW3 980 aa27.99■■■□□ 2.07
CHMP4B-201ENST00000217402 CELF6Q96J87 481 aaKnown RBP27.99■■■□□ 2.07
CHMP4B-201ENST00000217402 PIAS3Q9Y6X2 628 aa27.99■■■□□ 2.07
CHMP4B-201ENST00000217402 KDSRQ06136 332 aa27.98■■■□□ 2.07
CHMP4B-201ENST00000217402 SLC9A4Q6AI14 798 aa27.98■■■□□ 2.07
CHMP4B-201ENST00000217402 ASTLQ6HA08 431 aaPredicted RBP27.98■■■□□ 2.07
CHMP4B-201ENST00000217402 PLD5Q8N7P1 536 aa27.98■■■□□ 2.07
CHMP4B-201ENST00000217402 FIBINQ8TAL6 211 aa27.98■■■□□ 2.07
CHMP4B-201ENST00000217402 ABCB8Q9NUT2 735 aa27.98■■■□□ 2.07
CHMP4B-201ENST00000217402 TBC1D30Q9Y2I9 924 aa27.98■■■□□ 2.07
CHMP4B-201ENST00000217402 KIF2AO00139 706 aaPredicted RBP27.97■■■□□ 2.07
CHMP4B-201ENST00000217402 MFSD11O43934 449 aa27.97■■■□□ 2.07
CHMP4B-201ENST00000217402 CD70P32970 193 aa27.97■■■□□ 2.07
CHMP4B-201ENST00000217402 OPRD1P41143 372 aa27.97■■■□□ 2.07
CHMP4B-201ENST00000217402 LMAN2Q12907 356 aa27.97■■■□□ 2.07
CHMP4B-201ENST00000217402 TFDP2Q14188 446 aa27.97■■■□□ 2.07
CHMP4B-201ENST00000217402 SETD3Q86TU7 594 aaPredicted RBP27.97■■■□□ 2.07
CHMP4B-201ENST00000217402 PBKQ96KB5 322 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms