RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 RSPH3Q86UC2 560 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 ARHGAP18Q8N392 663 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 DCLK2Q8N568 766 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 PYDC1Q8WXC3 89 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 ZNF560Q96MR9 790 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 CDH19Q9H159 772 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 PRDM12Q9H4Q4 367 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 ARHGAP26Q9UNA1 814 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 RAD54BQ9Y620 910 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 EME2A4GXA9 379 aaPredicted RBP13.62□□□□□ -0.23
SRP54-201ENST00000216774 KPNA7A9QM74 516 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 HCRTO43612 131 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 NCF2P19878 526 aaPredicted RBP13.62□□□□□ -0.23
SRP54-201ENST00000216774 ITGAXP20702 1163 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 LMO2P25791 158 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 NOS2P35228 1153 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 PNPLA4P41247 253 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 ERFP50548 548 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 PCBP1Q15365 356 aaKnown RBP eCLIP13.62□□□□□ -0.238e-10■■□□□ 11.9
SRP54-201ENST00000216774 OTUD1Q5VV17 481 aaPredicted RBP13.62□□□□□ -0.23
SRP54-201ENST00000216774 CWF19L1Q69YN2 538 aaKnown RBP13.62□□□□□ -0.23
SRP54-201ENST00000216774 NOTUMQ6P988 496 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 LIMS2Q7Z4I7 341 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 DEFB132Q7Z7B7 95 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 TMEM135Q86UB9 458 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 FBXW8Q8N3Y1 598 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 NME8Q8N427 588 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.62□□□□□ -0.23
SRP54-201ENST00000216774 SLC26A7Q8TE54 656 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 FAM149B1Q96BN6 582 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 TNIP3Q96KP6 325 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 ADAMTS10Q9H324 1103 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 STAP1Q9ULZ2 295 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 POLR2AP24928 1970 aaKnown RBP13.62□□□□□ -0.23
SRP54-201ENST00000216774 ERI2A8K979 691 aaKnown RBP13.61□□□□□ -0.23
SRP54-201ENST00000216774 HSPA4LO95757 839 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 AP2A1O95782 977 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 PIM1P11309 404 aaPredicted RBP13.61□□□□□ -0.23
SRP54-201ENST00000216774 NUMBP49757 651 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 EPHB1P54762 984 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 RPL26P61254 145 aaKnown RBP13.61□□□□□ -0.23
SRP54-201ENST00000216774 CDC42EP1Q00587 391 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 PPIL2Q13356 520 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 KIZQ2M2Z5 673 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 DCAF6Q58WW2 860 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 CFAP157Q5JU67 520 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 VWA5B1Q5TIE3 1220 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 PDZD4Q76G19 769 aaPredicted RBP13.61□□□□□ -0.23
SRP54-201ENST00000216774 FASTKD5Q7L8L6 764 aaKnown RBP13.61□□□□□ -0.23
SRP54-201ENST00000216774 CMC1Q7Z7K0 106 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 CLEC14AQ86T13 490 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 SULF1Q8IWU6 871 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 ANKRD13AQ8IZ07 590 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 DEFB107AQ8IZN7 70 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 FCRL3Q96P31 734 aaPredicted RBP13.61□□□□□ -0.23
SRP54-201ENST00000216774 TUBGCP5Q96RT8 1024 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 NPY6RQ99463 290 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 RTKNQ9BST9 563 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 EIF2AQ9BY44 585 aaKnown RBP13.61□□□□□ -0.23
SRP54-201ENST00000216774 CEP41Q9BYV8 373 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 KLHL4Q9C0H6 718 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 COG4Q9H9E3 785 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 PIDD1Q9HB75 910 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 BFARQ9NZS9 450 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 POMPQ9Y244 141 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 EEF2KO00418 725 aaKnown RBP13.61□□□□□ -0.23
SRP54-201ENST00000216774 DCLK1O15075 740 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 NCAM2O15394 837 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 ADCY6O43306 1168 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 PDE5AO76074 875 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 COX4I1P13073 169 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 AIF1P55008 147 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 ADIGQ0VDE8 80 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 GLRA4Q5JXX5 417 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 FSTL4Q6MZW2 842 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 POTEAQ6S8J7 498 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 FRMD7Q6ZUT3 714 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 CATSPER4Q7RTX7 472 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 PID1Q7Z2X4 250 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 STRA8Q7Z7C7 330 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 PIGZQ86VD9 579 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 PHTF2Q8N3S3 785 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 APPL2Q8NEU8 664 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 SHKBP1Q8TBC3 707 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 DCPSQ96C86 337 aaKnown RBP13.61□□□□□ -0.23
SRP54-201ENST00000216774 TSPAN18Q96SJ8 248 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 KCNK16Q96T55 309 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 HNRNPABQ99729 332 aaKnown RBP13.61□□□□□ -0.23
SRP54-201ENST00000216774 VANGL2Q9ULK5 521 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 SCN4AP35499 1836 aa13.61□□□□□ -0.23
SRP54-201ENST00000216774 ADM5C9JUS6 153 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 G3V2L1 256 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 CASQ2O14958 399 aaPredicted RBP13.6□□□□□ -0.23
SRP54-201ENST00000216774 DCXO43602 365 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 TIMM44O43615 452 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 CREB3O43889 395 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 PEX1O43933 1283 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 RECQL4O94761 1208 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 MTTPP55157 894 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 TBL3Q12788 808 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms