RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 MYOZ2Q9NPC6 264 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 AGPAT3Q9NRZ7 376 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 RAB26Q9ULW5 256 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 SQORQ9Y6N5 450 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 TRIM38O00635 465 aa10.65□□□□□ -0.71
VCL-201ENST00000211998 SSNA1O43805 119 aa10.65□□□□□ -0.71
VCL-201ENST00000211998 NOS1APO75052 506 aaPredicted RBP10.65□□□□□ -0.71
VCL-201ENST00000211998 TMCC2O75069 709 aa10.65□□□□□ -0.71
VCL-201ENST00000211998 CYP2C8P10632 490 aa10.65□□□□□ -0.71
VCL-201ENST00000211998 PPP3CCP48454 512 aa10.65□□□□□ -0.71
VCL-201ENST00000211998 MGAT5Q09328 741 aa10.65□□□□□ -0.71
VCL-201ENST00000211998 AADACL2Q6P093 401 aa10.65□□□□□ -0.71
VCL-201ENST00000211998 NOTUMQ6P988 496 aa10.65□□□□□ -0.71
VCL-201ENST00000211998 CACTIN-AS1Q8N1I8 211 aa10.65□□□□□ -0.71
VCL-201ENST00000211998 CAMKK1Q8N5S9 505 aa10.65□□□□□ -0.71
VCL-201ENST00000211998 MCFD2Q8NI22 146 aa10.65□□□□□ -0.71
VCL-201ENST00000211998 SPIRE2Q8WWL2 714 aa10.65□□□□□ -0.71
VCL-201ENST00000211998 TCF12Q99081 682 aa10.65□□□□□ -0.71
VCL-201ENST00000211998 CHST7Q9NS84 486 aa10.65□□□□□ -0.71
VCL-201ENST00000211998 FBXO9Q9UK97 447 aaPredicted RBP10.65□□□□□ -0.71
VCL-201ENST00000211998 RNF112Q9ULX5 631 aa10.65□□□□□ -0.71
VCL-201ENST00000211998 SYNPO2Q9UMS6 1093 aa10.65□□□□□ -0.71
VCL-201ENST00000211998 TK2O00142 265 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 USP12O75317 370 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 TPBGLP0DKB5 382 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 ALDH6A1Q02252 535 aaKnown RBP10.64□□□□□ -0.71
VCL-201ENST00000211998 CSHL1Q14406 222 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 DDI2Q5TDH0 399 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 C16orf46Q6P387 395 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 KYAT3Q6YP21 454 aaKnown RBP10.64□□□□□ -0.71
VCL-201ENST00000211998 CLNKQ7Z7G1 428 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 DDX53Q86TM3 631 aaKnown RBP10.64□□□□□ -0.71
VCL-201ENST00000211998 ADCY4Q8NFM4 1077 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 ACTL9Q8TC94 416 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 APOL5Q9BWW9 433 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 VAV3Q9UKW4 847 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 PNMA8BQ9ULN7 279 aaPredicted RBP10.64□□□□□ -0.71
VCL-201ENST00000211998 PSMD13Q9UNM6 376 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 TMED5Q9Y3A6 229 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 NCF1BA6NI72 391 aaPredicted RBP10.64□□□□□ -0.71
VCL-201ENST00000211998 NCF1CA8MVU1 366 aaPredicted RBP10.64□□□□□ -0.71
VCL-201ENST00000211998 SIN3BO75182 1162 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 ENO2P09104 434 aaPredicted RBP10.64□□□□□ -0.71
VCL-201ENST00000211998 NCF1P14598 390 aaPredicted RBP10.64□□□□□ -0.71
VCL-201ENST00000211998 ZNF37AP17032 561 aaPredicted RBP10.64□□□□□ -0.71
VCL-201ENST00000211998 AKT1P31749 480 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 SREBF2Q12772 1141 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 CLEC16AQ2KHT3 1053 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 PGS1Q32NB8 556 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 BOLA3Q53S33 107 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 GATAD2AQ86YP4 633 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 EPHX4Q8IUS5 362 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 ANKRD13AQ8IZ07 590 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 TTC30BQ8N4P2 665 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 SLC16A10Q8TF71 515 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 CLPTM1LQ96KA5 538 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 SLC7A5P2Q9GIP4 190 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 BAIAP2Q9UQB8 552 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 CTSHP09668 335 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 RAB15P59190 212 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 PSME3P61289 254 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 PHC1P78364 1004 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 BST1Q10588 318 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 MSLNQ13421 630 aaPredicted RBP10.64□□□□□ -0.71
VCL-201ENST00000211998 PTAR1Q7Z6K3 402 aaPredicted RBP10.64□□□□□ -0.71
VCL-201ENST00000211998 RBM12BQ8IXT5 1001 aaKnown RBP10.64□□□□□ -0.71
VCL-201ENST00000211998 SP140LQ9H930 580 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 PLA2G4CQ9UP65 541 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 CAMSAP1Q5T5Y3 1602 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 RBP1P09455 135 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 FEN1P39748 380 aaKnown RBP10.64□□□□□ -0.71
VCL-201ENST00000211998 PPP4CP60510 307 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 DUPD1Q68J44 220 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 EFCAB12Q6NXP0 572 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 POLNQ7Z5Q5 900 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 LINC00523Q86TU6 105 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 SLC47A2Q86VL8 602 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 HIPK1Q86Z02 1210 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 MARK4Q96L34 752 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 EBF3Q9H4W6 596 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 EBF2Q9HAK2 575 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 PTPRHQ9HD43 1115 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 CCRL2O00421 344 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 MYL12BO14950 172 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 TSPAN19P0C672 248 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 ARHGEF7Q14155 803 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 CRTC3Q6UUV7 619 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 PRR23CQ6ZRP0 262 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 ILDR1Q86SU0 546 aaPredicted RBP10.64□□□□□ -0.71
VCL-201ENST00000211998 ZNF540Q8NDQ6 660 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 OR8H1Q8NGG4 311 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 UBA3Q8TBC4 463 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 ART4Q93070 314 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 PHF12Q96QT6 1004 aa10.64□□□□□ -0.71
VCL-201ENST00000211998 CCDC154A6NI56 674 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 LRRC10BA6NIK2 292 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 LOC110117498-PIK3R3F6TDL0 507 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 PRRG1O14668 218 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 FARP2O94887 1054 aaPredicted RBP10.63□□□□□ -0.71
VCL-201ENST00000211998 CHRM3P20309 590 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms