RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 MRPS22P82650 360 aaKnown RBP15.45■□□□□ 0.06
EFNB1-201ENST00000204961 BPTFQ12830 3046 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 IYDQ6PHW0 289 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 ZNF184Q99676 751 aaPredicted RBP15.45■□□□□ 0.06
EFNB1-201ENST00000204961 IL1RL2Q9HB29 575 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 SNX15Q9NRS6 342 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 PCDHA11Q9Y5I1 949 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 IGKV6-21A0A0C4DH24 114 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 ATP6AP2A0A1C7CYW4 349 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 YJEFN3A6XGL0 299 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 E7ENQ6 273 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 ATP6AP2O75787 350 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 HNRNPLP14866 589 aaKnown RBP eCLIP15.45■□□□□ 0.06
EFNB1-201ENST00000204961 RAG1P15918 1043 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 ERCC2P18074 760 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 MRPS35P82673 323 aaKnown RBP15.45■□□□□ 0.06
EFNB1-201ENST00000204961 C11orf91Q3C1V1 193 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 SDHAF4Q5VUM1 108 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 ARHGAP36Q6ZRI8 547 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 MAVSQ7Z434 540 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 BEST2Q8NFU1 509 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 SLC45A3Q96JT2 553 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 PAAF1Q9BRP4 392 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 FTHL17Q9BXU8 183 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 SEMA6AQ9H2E6 1030 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 COG4Q9H9E3 785 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 THAP1Q9NVV9 213 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 APPL1Q9UKG1 709 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 SHROOM3Q8TF72 1996 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 FER1L6Q2WGJ9 1857 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 CAPN8A6NHC0 703 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 JUNP05412 331 aaKnown RBP15.44■□□□□ 0.06
EFNB1-201ENST00000204961 COPAP53621 1224 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 PLPPR4Q7Z2D5 763 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 DENND6AQ8IWF6 608 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 CXorf38Q8TB03 319 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 NMD3Q96D46 503 aaKnown RBP15.44■□□□□ 0.06
EFNB1-201ENST00000204961 NDNQ99608 321 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 VCXQ9H320 206 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 CPA4Q9UI42 421 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 LOXHD1Q8IVV2 1947 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 PLIN3O60664 434 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 OR6B1O95007 311 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 FGF3P11487 239 aaPredicted RBP15.44■□□□□ 0.06
EFNB1-201ENST00000204961 EDNRBP24530 442 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 AQP4P55087 323 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 AP2B1P63010 937 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 OSTM1Q86WC4 334 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 KCTD4Q8WVF5 259 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 LENG8Q96PV6 779 aaPredicted RBP15.44■□□□□ 0.06
EFNB1-201ENST00000204961 ASB7Q9H672 318 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 SUDS3Q9H7L9 328 aaPredicted RBP15.44■□□□□ 0.06
EFNB1-201ENST00000204961 CHST12Q9NRB3 414 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 KCNK4Q9NYG8 393 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 PHIPQ8WWQ0 1821 aa15.44■□□□□ 0.06
EFNB1-201ENST00000204961 GOLGA8CPA6NN73 597 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 MYL3P08590 195 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 NFKB1P19838 968 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 IDH3AP50213 366 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 TPI1P60174 286 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 TBL3Q12788 808 aaKnown RBP15.43■□□□□ 0.06
EFNB1-201ENST00000204961 USP10Q14694 798 aaKnown RBP15.43■□□□□ 0.06
EFNB1-201ENST00000204961 PCLAFQ15004 111 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 SFT2D3Q587I9 215 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 GPRIN1Q7Z2K8 1008 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 SNX32Q86XE0 403 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 PCDH20Q8N6Y1 951 aaKnown RBP15.43■□□□□ 0.06
EFNB1-201ENST00000204961 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.43■□□□□ 0.06
EFNB1-201ENST00000204961 GTSE1Q9NYZ3 720 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 SMIM28A0A1B0GU29 152 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.43■□□□□ 0.06
EFNB1-201ENST00000204961 TREHO43280 583 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 ZBTB14O43829 449 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 CSPG5O95196 566 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 HMGB2P26583 209 aaKnown RBP15.43■□□□□ 0.06
EFNB1-201ENST00000204961 NMBRP28336 390 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 HOXA11P31270 313 aaPredicted RBP15.43■□□□□ 0.06
EFNB1-201ENST00000204961 PTPN7P35236 360 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 ZRSR2Q15696 482 aaKnown RBP15.43■□□□□ 0.06
EFNB1-201ENST00000204961 FSTL4Q6MZW2 842 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 ARRDC4Q8NCT1 418 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 SLC10A4Q96EP9 437 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 PHF12Q96QT6 1004 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 LNPEPQ9UIQ6 1025 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 PCDHGB4Q9UN71 923 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 SOX13Q9UN79 622 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 PCDHGB5Q9Y5G0 923 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 TLL2Q9Y6L7 1015 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 A0A0A0MRY4 1105 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 MYBPHLA2RUH7 354 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 RNASEH1O60930 286 aaKnown RBP15.43■□□□□ 0.06
EFNB1-201ENST00000204961 C1QAP02745 245 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 SMPD1P17405 629 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 CHRNA4P43681 627 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 DLG1Q12959 904 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 C9orf57Q5W0N0 161 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 CWF19L1Q69YN2 538 aaKnown RBP15.43■□□□□ 0.06
EFNB1-201ENST00000204961 CHSY1Q86X52 802 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 B3GALT6Q96L58 329 aa15.43■□□□□ 0.06
EFNB1-201ENST00000204961 SPATA13Q96N96 652 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms