RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 PIK3R1P27986 724 aa17.14■□□□□ 0.34
CTDP1-201ENST00000075430 ZNF143P52747 638 aaPredicted RBP17.14■□□□□ 0.34
CTDP1-201ENST00000075430 MAP3K21Q5TCX8 1036 aa17.14■□□□□ 0.34
CTDP1-201ENST00000075430 UGT2A3Q6UWM9 527 aa17.14■□□□□ 0.34
CTDP1-201ENST00000075430 BNC2Q6ZN30 1099 aaPredicted RBP17.14■□□□□ 0.34
CTDP1-201ENST00000075430 UTS2BQ765I0 119 aa17.14■□□□□ 0.34
CTDP1-201ENST00000075430 COPS5Q92905 334 aa17.14■□□□□ 0.34
CTDP1-201ENST00000075430 RPL10LQ96L21 214 aaKnown RBP17.14■□□□□ 0.34
CTDP1-201ENST00000075430 SNX15Q9NRS6 342 aa17.14■□□□□ 0.34
CTDP1-201ENST00000075430 TMX2-CTNND1H3BSU7 103 aa17.14■□□□□ 0.33
CTDP1-201ENST00000075430 HNRNPLP14866 589 aaKnown RBP eCLIP17.14■□□□□ 0.33
CTDP1-201ENST00000075430 TMEM259Q4ZIN3 620 aa17.14■□□□□ 0.33
CTDP1-201ENST00000075430 MOB2Q70IA6 237 aa17.14■□□□□ 0.33
CTDP1-201ENST00000075430 NAT16Q8N8M0 369 aa17.14■□□□□ 0.33
CTDP1-201ENST00000075430 SORT1Q99523 831 aa17.14■□□□□ 0.33
CTDP1-201ENST00000075430 GPAMQ9HCL2 828 aa17.14■□□□□ 0.33
CTDP1-201ENST00000075430 SNNO75324 88 aaPredicted RBP17.14■□□□□ 0.33
CTDP1-201ENST00000075430 IL4RP24394 825 aa17.14■□□□□ 0.33
CTDP1-201ENST00000075430 GABRB2P47870 512 aa17.14■□□□□ 0.33
CTDP1-201ENST00000075430 MTX3Q5HYI7 312 aa17.14■□□□□ 0.33
CTDP1-201ENST00000075430 PPP1R26Q5T8A7 1209 aaPredicted RBP17.14■□□□□ 0.33
CTDP1-201ENST00000075430 FKBP1CQ5VVH2 108 aa17.14■□□□□ 0.33
CTDP1-201ENST00000075430 TMEM79Q9BSE2 394 aa17.14■□□□□ 0.33
CTDP1-201ENST00000075430 ZNF518BQ9C0D4 1074 aa17.14■□□□□ 0.33
CTDP1-201ENST00000075430 XYLT2Q9H1B5 865 aa17.14■□□□□ 0.33
CTDP1-201ENST00000075430 HOXC10Q9NYD6 342 aa17.14■□□□□ 0.33
CTDP1-201ENST00000075430 CCDC167Q9P0B6 97 aa17.14■□□□□ 0.33
CTDP1-201ENST00000075430 SYNPO2Q9UMS6 1093 aa17.14■□□□□ 0.33
CTDP1-201ENST00000075430 PLA2G6O60733 806 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 HOXC6P09630 235 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 FAM58BPP0C7Q3 252 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 DESP17661 470 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 CYLC2Q14093 348 aaPredicted RBP17.13■□□□□ 0.33
CTDP1-201ENST00000075430 DBN1Q16643 649 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 ANO4Q32M45 955 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 FSCBQ5H9T9 825 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 GK5Q6ZS86 529 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 LILRA2Q8N149 483 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 CCDC185Q8N715 623 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 KYQ8NBH2 561 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 PIF1Q9H611 641 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 IARS2Q9NSE4 1012 aaKnown RBP17.13■□□□□ 0.33
CTDP1-201ENST00000075430 ZNF214Q9UL59 606 aaPredicted RBP17.13■□□□□ 0.33
CTDP1-201ENST00000075430 TMCC1O94876 653 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 MT-ND1P03886 318 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 RGS2P41220 211 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 MYBPC1Q00872 1141 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 IFRD2Q12894 506 aaPredicted RBP17.13■□□□□ 0.33
CTDP1-201ENST00000075430 GEN1Q17RS7 908 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 LSM12Q3MHD2 195 aaKnown RBP17.13■□□□□ 0.33
CTDP1-201ENST00000075430 FAM47CQ5HY64 1035 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 LPCAT2Q7L5N7 544 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 ATXN3LQ9H3M9 355 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 ELP3Q9H9T3 547 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 AP4E1Q9UPM8 1137 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 AKT3Q9Y243 479 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 SF3B1O75533 1304 aaKnown RBP eCLIP17.13■□□□□ 0.33
CTDP1-201ENST00000075430 NEMP2A6NFY4 417 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 UGT1A6P19224 532 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 GPD2P43304 727 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 TUBB3Q13509 450 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 ACBD5Q5T8D3 534 aaPredicted RBP17.13■□□□□ 0.33
CTDP1-201ENST00000075430 IL23RQ5VWK5 629 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 CHST15Q7LFX5 561 aaPredicted RBP17.13■□□□□ 0.33
CTDP1-201ENST00000075430 LRTOMTQ8WZ04 291 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 APBA2Q99767 749 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 ACO2Q99798 780 aaKnown RBP17.13■□□□□ 0.33
CTDP1-201ENST00000075430 GATA5Q9BWX5 397 aaPredicted RBP17.13■□□□□ 0.33
CTDP1-201ENST00000075430 WDR41Q9HAD4 459 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 SIX4Q9UIU6 781 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 PCDHA11Q9Y5I1 949 aa17.13■□□□□ 0.33
CTDP1-201ENST00000075430 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.12■□□□□ 0.33
CTDP1-201ENST00000075430 KLF11O14901 512 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 PSMC3P17980 439 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 PITX1P78337 314 aaPredicted RBP17.12■□□□□ 0.33
CTDP1-201ENST00000075430 PLOD1Q02809 727 aaPredicted RBP17.12■□□□□ 0.33
CTDP1-201ENST00000075430 TREML2Q5T2D2 321 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 CERCAMQ5T4B2 595 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 ZNF280DQ6N043 979 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 AAGABQ6PD74 315 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 CTU1Q7Z7A3 348 aaKnown RBP17.12■□□□□ 0.33
CTDP1-201ENST00000075430 ZNF786Q8N393 782 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 ACTRT2Q8TDY3 377 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 NLRP7Q8WX94 980 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 SIKE1Q9BRV8 207 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 HESX1Q9UBX0 185 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 ANKRD31Q8N7Z5 1873 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 ARHGEF37A1IGU5 675 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 H3BNX3 289 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 GPR25O00155 361 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 RNF103O00237 685 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 XPOTO43592 962 aaKnown RBP17.12■□□□□ 0.33
CTDP1-201ENST00000075430 VTNP04004 478 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 CEACAM7Q14002 265 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 PRPSAP1Q14558 356 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 HSDL1Q3SXM5 330 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 LRRC8EQ6NSJ5 796 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 KYAT3Q6YP21 454 aaKnown RBP17.12■□□□□ 0.33
CTDP1-201ENST00000075430 CLVS1Q8IUQ0 354 aaPredicted RBP17.12■□□□□ 0.33
CTDP1-201ENST00000075430 TSNARE1Q96NA8 513 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms