RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 RPS6KL1Q9Y6S9 549 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 PTPRDP23468 1912 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 A0A0G2JND7 137 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 MOXD2PA6NHM9 499 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 ARHGAP42A6NI28 874 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 I6L893 689 aaPredicted RBP8.46□□□□□ -1.05
VAMP3-201ENST00000054666 INPPL1O15357 1258 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 FGF10O15520 208 aaPredicted RBP8.46□□□□□ -1.05
VAMP3-201ENST00000054666 GLRA3O75311 464 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 TGDSO95455 350 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 EOMESO95936 686 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 IL1BP01584 269 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 SRGAP2BP0DMP2 458 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 HOXD10P28358 340 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 CCR1P32246 355 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 CRHR1P34998 444 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 ARFIP2P53365 341 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 ACLYP53396 1101 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 ELF3P78545 371 aaPredicted RBP8.46□□□□□ -1.05
VAMP3-201ENST00000054666 TMPRSS15P98073 1019 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 PDE1BQ01064 536 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 ZNF33AQ06730 810 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 OVGP1Q12889 678 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 DBN1Q16643 649 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 TRIM71Q2Q1W2 868 aaKnown RBP8.46□□□□□ -1.05
VAMP3-201ENST00000054666 TEX44Q53QW1 395 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 SPDYAQ5MJ70 313 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 NAPEPLDQ6IQ20 393 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 PACS1Q6VY07 963 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 TP53INP2Q8IXH6 220 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 DCP1BQ8IZD4 617 aaKnown RBP8.46□□□□□ -1.05
VAMP3-201ENST00000054666 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.46□□□□□ -1.05
VAMP3-201ENST00000054666 OR52K1Q8NGK4 314 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 PPP1R14CQ8TAE6 165 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 RAB3IL1Q8TBN0 382 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 PTPRN2Q92932 1015 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 ZNF669Q96BR6 464 aaPredicted RBP8.46□□□□□ -1.05
VAMP3-201ENST00000054666 CERS2Q96G23 380 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 OXNAD1Q96HP4 312 aaPredicted RBP8.46□□□□□ -1.05
VAMP3-201ENST00000054666 TMEM209Q96SK2 561 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 OSBPL2Q9H1P3 480 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 SMOC2Q9H3U7 446 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 TMEM51Q9NW97 253 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 SNX10Q9Y5X0 201 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 MYO16Q9Y6X6 1858 aa8.46□□□□□ -1.05
VAMP3-201ENST00000054666 TMEM88BA6NKF7 163 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 ZBTB24O43167 697 aaPredicted RBP8.46□□□□□ -1.06
VAMP3-201ENST00000054666 PSMD3O43242 534 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 HNRNPCL1O60812 293 aaKnown RBP8.46□□□□□ -1.06
VAMP3-201ENST00000054666 NEBLO76041 1014 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 IGLV3-25P01717 112 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 ITGB1P05556 798 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 CKBP12277 381 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 NFKB1P19838 968 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 DNAJB2P25686 324 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 GP5P40197 560 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 ZBTB16Q05516 673 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 ZBTB17Q13105 803 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 NOGQ13253 232 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 SLC39A12Q504Y0 691 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 NOMO2Q5JPE7 1267 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 CD300LGQ6UXG3 332 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 KYAT3Q6YP21 454 aaKnown RBP8.46□□□□□ -1.06
VAMP3-201ENST00000054666 CDHR3Q6ZTQ4 885 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 SLC24A5Q71RS6 500 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 NUDCD3Q8IVD9 361 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 SCN4BQ8IWT1 228 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 ZNF276Q8N554 614 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 LZTR1Q8N653 840 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 SCAMP5Q8TAC9 235 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 ARNTL2Q8WYA1 636 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 E2F7Q96AV8 911 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 TBC1D31Q96DN5 1066 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 SERPINB11Q96P15 392 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 HAPLN3Q96S86 360 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 CPNE1Q99829 537 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 SIK2Q9H0K1 926 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 RGS18Q9NS28 235 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 ARHGEF38Q9NXL2 777 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 ABI2Q9NYB9 513 aaPredicted RBP8.46□□□□□ -1.06
VAMP3-201ENST00000054666 KANSL3Q9P2N6 904 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 MTO1Q9Y2Z2 717 aaKnown RBP8.46□□□□□ -1.06
VAMP3-201ENST00000054666 COL4A4P53420 1690 aaPredicted RBP8.46□□□□□ -1.06
VAMP3-201ENST00000054666 SHROOM3Q8TF72 1996 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 NLRC5Q86WI3 1866 aa8.46□□□□□ -1.06
VAMP3-201ENST00000054666 CCDC195A0A1B0GUA6 201 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 TMEM189-UBE2V1I3L0A0 370 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 DFFAO00273 331 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 TPP1O14773 563 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 CHUKO15111 745 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 BIRC5O15392 142 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 MGRN1O60291 552 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 USP1O94782 785 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 ITGA2BP08514 1039 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 TARSP26639 723 aaKnown RBP8.45□□□□□ -1.06
VAMP3-201ENST00000054666 OR1G1P47890 313 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 KCNJ2P63252 427 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 CHI3L2Q15782 390 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 NFE2Q16621 373 aaPredicted RBP8.45□□□□□ -1.06
VAMP3-201ENST00000054666 LINC00523Q86TU6 105 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms