RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 ACADMP11310 421 aa19.65■□□□□ 0.74
TRAPPC6A-201ENST00000006275 IL12RB1P42701 662 aa19.65■□□□□ 0.74
TRAPPC6A-201ENST00000006275 CSNK1EP49674 416 aaKnown RBP19.65■□□□□ 0.74
TRAPPC6A-201ENST00000006275 TPM4P67936 248 aa19.65■□□□□ 0.74
TRAPPC6A-201ENST00000006275 CAMK2BQ13554 666 aa19.65■□□□□ 0.74
TRAPPC6A-201ENST00000006275 FMNL3Q8IVF7 1028 aa19.65■□□□□ 0.74
TRAPPC6A-201ENST00000006275 WDTC1Q8N5D0 677 aa19.65■□□□□ 0.74
TRAPPC6A-201ENST00000006275 C1orf131Q8NDD1 294 aaKnown RBP19.65■□□□□ 0.74
TRAPPC6A-201ENST00000006275 UCMAQ8WVF2 138 aa19.65■□□□□ 0.74
TRAPPC6A-201ENST00000006275 NUP58Q9BVL2 599 aa19.65■□□□□ 0.74
TRAPPC6A-201ENST00000006275 DCLK3Q9C098 648 aa19.65■□□□□ 0.74
TRAPPC6A-201ENST00000006275 ZNF510Q9Y2H8 683 aa19.65■□□□□ 0.74
TRAPPC6A-201ENST00000006275 NPC1O15118 1278 aa19.64■□□□□ 0.73
TRAPPC6A-201ENST00000006275 PAPSS1O43252 624 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC6A-201ENST00000006275 TNFSF14O43557 240 aa19.64■□□□□ 0.73
TRAPPC6A-201ENST00000006275 GFPT2O94808 682 aa19.64■□□□□ 0.73
TRAPPC6A-201ENST00000006275 AFF3P51826 1226 aaKnown RBP19.64■□□□□ 0.73
TRAPPC6A-201ENST00000006275 TAF3Q5VWG9 929 aa19.64■□□□□ 0.73
TRAPPC6A-201ENST00000006275 Q6ZNB5 142 aa19.64■□□□□ 0.73
TRAPPC6A-201ENST00000006275 LUZP1Q86V48 1076 aa19.64■□□□□ 0.73
TRAPPC6A-201ENST00000006275 PIP4K2CQ8TBX8 421 aa19.64■□□□□ 0.73
TRAPPC6A-201ENST00000006275 PLD4Q96BZ4 506 aa19.64■□□□□ 0.73
TRAPPC6A-201ENST00000006275 PPP1R13BQ96KQ4 1090 aa19.64■□□□□ 0.73
TRAPPC6A-201ENST00000006275 CPXM1Q96SM3 734 aa19.64■□□□□ 0.73
TRAPPC6A-201ENST00000006275 RTN4Q9NQC3 1192 aaKnown RBP19.64■□□□□ 0.73
TRAPPC6A-201ENST00000006275 THAP10Q9P2Z0 257 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC6A-201ENST00000006275 TJP2Q9UDY2 1190 aa19.64■□□□□ 0.73
TRAPPC6A-201ENST00000006275 FBXO10Q9UK96 956 aa19.64■□□□□ 0.73
TRAPPC6A-201ENST00000006275 HBS1LQ9Y450 684 aaKnown RBP19.64■□□□□ 0.73
TRAPPC6A-201ENST00000006275 TEX33O43247 280 aa19.63■□□□□ 0.73
TRAPPC6A-201ENST00000006275 CORO1AP31146 461 aaKnown RBP19.63■□□□□ 0.73
TRAPPC6A-201ENST00000006275 SOX5P35711 763 aa19.63■□□□□ 0.73
TRAPPC6A-201ENST00000006275 STAT1P42224 750 aa19.63■□□□□ 0.73
TRAPPC6A-201ENST00000006275 JAM2P57087 298 aa19.63■□□□□ 0.73
TRAPPC6A-201ENST00000006275 SNX16P57768 344 aa19.63■□□□□ 0.73
TRAPPC6A-201ENST00000006275 SMAD1Q15797 465 aaKnown RBP19.63■□□□□ 0.73
TRAPPC6A-201ENST00000006275 KIF19Q2TAC6 998 aa19.63■□□□□ 0.73
TRAPPC6A-201ENST00000006275 MSANTD2Q6P1R3 559 aa19.63■□□□□ 0.73
TRAPPC6A-201ENST00000006275 FAM124AQ86V42 546 aa19.63■□□□□ 0.73
TRAPPC6A-201ENST00000006275 TMEM35BQ8NCS4 154 aa19.63■□□□□ 0.73
TRAPPC6A-201ENST00000006275 C1orf216Q8TAB5 229 aa19.63■□□□□ 0.73
TRAPPC6A-201ENST00000006275 SLC27A6Q9Y2P4 619 aa19.63■□□□□ 0.73
TRAPPC6A-201ENST00000006275 BPTFQ12830 3046 aa19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 CAPN9O14815 690 aa19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 IGLV3-19P01714 112 aa19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 KLKB1P03952 638 aa19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 GRK6P43250 576 aa19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 ENPP2Q13822 863 aa19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 TEAD4Q15561 434 aa19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 TRIP4Q15650 581 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 GEN1Q17RS7 908 aa19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 OR6B2Q6IFH4 312 aa19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 DHRS13Q6UX07 377 aa19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 NOP9Q86U38 636 aaKnown RBP19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 DENND1CQ8IV53 801 aa19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 EPS8L1Q8TE68 723 aa19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 SLC39A7Q92504 469 aa19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 TRIM62Q9BVG3 475 aa19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 SYNCQ9H7C4 482 aa19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 SNX11Q9Y5W9 270 aa19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 SLCO1B1Q9Y6L6 691 aa19.62■□□□□ 0.73
TRAPPC6A-201ENST00000006275 GOLGA6L19H0YKK7 550 aa19.61■□□□□ 0.73
TRAPPC6A-201ENST00000006275 MSI1O43347 362 aaKnown RBP19.61■□□□□ 0.73
TRAPPC6A-201ENST00000006275 SERPINC1P01008 464 aa19.61■□□□□ 0.73
TRAPPC6A-201ENST00000006275 MMEP08473 750 aa19.61■□□□□ 0.73
TRAPPC6A-201ENST00000006275 HLA-EP13747 358 aa19.61■□□□□ 0.73
TRAPPC6A-201ENST00000006275 CDH5P33151 784 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC6A-201ENST00000006275 CHKAP35790 457 aa19.61■□□□□ 0.73
TRAPPC6A-201ENST00000006275 HARS2P49590 506 aaKnown RBP19.61■□□□□ 0.73
TRAPPC6A-201ENST00000006275 CCT8P50990 548 aa19.61■□□□□ 0.73
TRAPPC6A-201ENST00000006275 ZNF234Q14588 700 aa19.61■□□□□ 0.73
TRAPPC6A-201ENST00000006275 NFKBIBQ15653 356 aa19.61■□□□□ 0.73
TRAPPC6A-201ENST00000006275 PTPRNQ16849 979 aa19.61■□□□□ 0.73
TRAPPC6A-201ENST00000006275 PTPN20Q4JDL3 420 aa19.61■□□□□ 0.73
TRAPPC6A-201ENST00000006275 ZNF677Q86XU0 584 aa19.61■□□□□ 0.73
TRAPPC6A-201ENST00000006275 P2RY11Q96G91 374 aa19.61■□□□□ 0.73
TRAPPC6A-201ENST00000006275 PCED1AQ9H1Q7 454 aa19.61■□□□□ 0.73
TRAPPC6A-201ENST00000006275 AGO1Q9UL18 857 aaKnown RBP19.61■□□□□ 0.73
TRAPPC6A-201ENST00000006275 NAALADL1Q9UQQ1 740 aa19.61■□□□□ 0.73
TRAPPC6A-201ENST00000006275 ZNF462Q96JM2 2506 aa19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 A0A1B0GTH6 734 aa19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 E9PAM4 449 aa19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 TK2O00142 265 aa19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 PENKP01210 267 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 ERBB2P04626 1255 aa19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 FYNP06241 537 aa19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 EPHX1P07099 455 aa19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 COPAP53621 1224 aa19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 YWHAZP63104 245 aaKnown RBP19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 E2F5Q15329 346 aa19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 FAM183BPQ6ZVS7 135 aa19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 BEND5Q7L4P6 421 aa19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 ANKS1BQ7Z6G8 1248 aa19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 DQX1Q8TE96 717 aaKnown RBP19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 C6orf106Q9H6K1 298 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 POPDC2Q9HBU9 364 aa19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 ANKRD6Q9Y2G4 727 aa19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 PTPRQQ9UMZ3 2332 aa19.6■□□□□ 0.73
TRAPPC6A-201ENST00000006275 MAST4O15021 2626 aa19.59■□□□□ 0.73
TRAPPC6A-201ENST00000006275 PLK4O00444 970 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms