RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 LHX5Q9H2C1 402 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 CDC42EP4Q9H3Q1 356 aaKnown RBP10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 STOML1Q9UBI4 398 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 GTF2IRD1Q9UHL9 959 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 USP15Q9Y4E8 981 aaPredicted RBP10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 OPLAHO14841 1288 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 RAD51BO15315 384 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 C22orf31O95567 290 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 MGAT1P26572 445 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 GP5P40197 560 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 GLRBP48167 497 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 PKN2Q16513 984 aaKnown RBP10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 SCARA3Q6AZY7 606 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 FBXO25Q8TCJ0 367 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 MAGEC3Q8TD91 643 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 EIF2AQ9BY44 585 aaKnown RBP10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 TMEM161AQ9NX61 479 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 KIAA1522Q9P206 1035 aaPredicted RBP10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 ZSCAN9O15535 394 aaPredicted RBP10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 DNAJC8O75937 253 aaPredicted RBP10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 ENO3P13929 434 aaPredicted RBP10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 ATP4AP20648 1035 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 RBL1P28749 1068 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 NCALDP61601 193 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 FMO1Q01740 532 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 TAF10Q12962 218 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 RFX8Q6ZV50 586 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 SYTL1Q8IYJ3 562 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 CHPFQ8IZ52 775 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 SNX27Q96L92 541 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 ZNF670Q9BS34 389 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 C17orf80Q9BSJ5 609 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 EPN3Q9H201 632 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 ELOVL6Q9H5J4 265 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 ACTR8Q9H981 624 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 AHSPQ9NZD4 102 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 DUOX1Q9NRD9 1551 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 GOLGA8TH3BQL2 631 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 SCAMP3O14828 347 aaKnown RBP10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 NFATC1O95644 943 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 CRABP2P29373 138 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 PGM1P36871 562 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 ARHGAP1Q07960 439 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 PPP1R15BQ5SWA1 713 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 PPP2R2DQ66LE6 453 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 PPP4R4Q6NUP7 873 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 MTSS1LQ765P7 747 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 GPR152Q8TDT2 470 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 KCNK16Q96T55 309 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 MAN1C1Q9NR34 630 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 NCKIPSDQ9NZQ3 722 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 CFAP97Q9P2B7 532 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 AURKCQ9UQB9 309 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 A0A0A0MRY4 1105 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 WDR27A2RRH5 827 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 CFAP73A6NFT4 308 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 PSMD12O00232 456 aaPredicted RBP10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 WNT7AO00755 349 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 CCL16O15467 120 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 GPC1P35052 558 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 XRCC4Q13426 336 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 AASDHQ4L235 1098 aaPredicted RBP10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 SPATA13Q96N96 652 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 TCF25Q9BQ70 676 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 ACBD6Q9BR61 282 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 RMND5AQ9H871 391 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 VAPBO95292 243 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 FKBP9O95302 570 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 APODP05090 189 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 PCNAP12004 261 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 ELK3P41970 407 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 CLCNKBP51801 687 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 CDK16Q00536 496 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 KCNMA1Q12791 1236 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 NAB1Q13506 487 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 IRAK1BP1Q5VVH5 260 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 ZNF470Q6ECI4 717 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 LCLAT1Q6UWP7 414 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 FKBP9P1Q75LS8 142 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 PSTKQ8IV42 348 aaKnown RBP10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 ARNTL2Q8WYA1 636 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 OR8D1Q8WZ84 308 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 CPNE1Q99829 537 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 NMRAL1Q9HBL8 299 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 IL1BP01584 269 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 ITGB6P18564 788 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 TYMPP19971 482 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 SKOR1P84550 965 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 MPPE1Q53F39 396 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 ZNF697Q5TEC3 545 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 TTC7BQ86TV6 843 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 ATAD1Q8NBU5 361 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 C2orf15Q8WU43 125 aaKnown RBP10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 ACP6Q9NPH0 428 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 MORF4L1Q9UBU8 362 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 MRPL42Q9Y6G3 142 aaKnown RBP10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 TLL2Q9Y6L7 1015 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 MGAT4DA6NG13 374 aa10.56□□□□□ -0.72
NIPAL3-201ENST00000003912 H0Y3Z8 333 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms