RNA–Protein interactions for RNA: ENSMUST00000087050.6

Col4a4-201, Transcript of Collagen alpha-4(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a4, Length 10,108 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4-201ENSMUST00000087050 Ube2e3P52483 207 aa10.15□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Arpc4P59999 168 aaKnown RBP10.15□□□□□ -0.79
Col4a4-201ENSMUST00000087050 3830417A13RikQ8BQJ2 303 aa10.15□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Rab15Q8K386 212 aa10.15□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Fubp1Q91WJ8 651 aaKnown RBP10.15□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Slc13a3Q91Y63 600 aa10.15□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Eif3mQ99JX4 374 aa10.15□□□□□ -0.79
Col4a4-201ENSMUST00000087050 CatsperzQ9CQP8 194 aa10.15□□□□□ -0.79
Col4a4-201ENSMUST00000087050 CenpnQ9CZW2 337 aa10.15□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Ppil6Q9D6D8 278 aa10.15□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Erp27Q9D8U3 272 aa10.15□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Tmem176aQ9DCS1 244 aa10.15□□□□□ -0.79
Col4a4-201ENSMUST00000087050 PnkpQ9JLV6 522 aaKnown RBP10.15□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Smok3cA0A087WSF2 504 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Pik3r2O08908 722 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Rpl10aP53026 217 aaKnown RBP10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Rab2aP53994 212 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Fam126aQ6P9N1 521 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Q810S2 196 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Nlrp10Q8CCN1 673 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Tada2aQ8CHV6 443 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Tmcc3Q8R310 477 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Cdc16Q8R349 620 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Fis1Q9CQ92 152 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Mgrn1Q9D074 532 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Shank2Q80Z38 1476 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Klrb1Q0ZUP1 214 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Fam172aQ3TNH5 417 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Ttc9Q3V038 219 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 MelkQ61846 643 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Ptger2Q62053 362 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Abi3Q8BYZ1 367 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Dmtf1Q8CE22 761 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Ppwd1Q8CEC6 646 aaKnown RBP10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Tceal3Q8R0A5 200 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Ndfip2Q91ZP6 311 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Tnfaip8l2Q9D8Y7 184 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Sfmbt1Q9JMD1 863 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 NhsB1AV60 1647 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 PtproE9Q612 1226 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Hoxa2P31245 372 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 YwhaqP68254 245 aaKnown RBP10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Mief2Q5NCS9 454 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Tbx2Q60707 711 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Nup62Q63850 526 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Rxfp1Q6R6I7 758 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Cox18Q8VC74 331 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Pcdhac1Q91Y10 964 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Ubxn2aQ99KJ0 258 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 S100pbpQ9D5K4 396 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Kcnh4A2A5F7 1018 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Klhl32A2AJX0 620 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Lgr4A2ARI4 951 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Gal3st3P61315 431 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Csnk2bP67871 215 aaKnown RBP10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Trappc3lQ4KL14 181 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Olfr8Q60892 310 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 PnocQ64387 187 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 SugctQ7TNE1 436 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Ddhd1Q80YA3 547 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Ttc24Q8BYG0 334 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Rftn2Q8CHX7 500 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Tspan8Q8R3G9 235 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 WwoxQ91WL8 414 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Rfc5Q9D0F6 339 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Samd4aQ8CBY1 711 aaKnown RBP10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Fam96aQ9DCL2 160 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Bscl2Q9Z2E9 383 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Ms4a14A0A087WSD2 1232 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Ints6Q6PCM2 883 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Trappc12Q8K2L8 797 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Evi2bQ8VD58 444 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Cyp2c70Q91W64 489 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Tmed11Q9D2R4 215 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Copg2Q9QXK3 871 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Foxo4Q9WVH3 505 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 2610021A01RikE9Q0Q3 834 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Clk2O35491 499 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Gas2P11862 314 aaKnown RBP10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 NfycP70353 335 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Pcdhga10Q91XY9 930 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Cmtm6Q9CZ69 183 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Limd1Q9QXD8 668 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 AV320801A2AWL3 467 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Kpna6O35345 536 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Xirp1O70373 1129 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Ass1P16460 412 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Mmp14P53690 582 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Lpcat2Q8BYI6 544 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 OgtQ8CGY8 1046 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Pld1Q9Z280 1074 aa10.14□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Gm5930D3Z257 264 aa10.13□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Glyatl3E9Q5L8 290 aa10.13□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Tuba3aP05214 450 aaKnown RBP10.13□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Tas2r134Q7TQB0 298 aa10.13□□□□□ -0.79
Col4a4-201ENSMUST00000087050 BC048507Q80ZS7 89 aa10.13□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Nat14Q8BVG8 206 aa10.13□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Actr8Q8R2S9 624 aaKnown RBP10.13□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Tssk3Q9D2E1 268 aa10.13□□□□□ -0.79
Col4a4-201ENSMUST00000087050 Sae1Q9R1T2 350 aa10.13□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms