RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Aak1Q3UHJ0 959 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pde1aQ61481 565 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Mindy2Q6PDI6 601 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 CebpeQ6PZD9 281 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Camk1dQ8BW96 385 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 PiguQ8K358 434 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Kiaa1024Q8K3V7 917 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Zcchc14Q8VIG0 956 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Dcp1aQ91YD3 602 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ing5Q9D8Y8 240 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 1700001F09RikQ9DAR5 184 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Atf7ipQ7TT18 1306 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm5796E9Q7M8 205 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm6526G3X9Q9 198 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm3629K7N6Y2 205 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm10340K7N708 205 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm3696K7N751 203 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm8281L7N235 204 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ppt2O35448 302 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Slc3a2P10852 526 aaKnown RBP9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Prkar2aP12367 401 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Acsm3Q3UNX5 580 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Q3UY34 256 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Zfp235Q499D5 702 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Esyt3Q5DTI8 891 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Sfmbt2Q5DTW2 938 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Lcn4Q62472 185 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Fbxo22Q78JE5 402 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Olfr524Q7TRU0 318 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 IpmkQ7TT16 396 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Msantd1Q8BIL2 278 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 RangrfQ9JIB0 185 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Dnajb1Q9QYJ3 340 aaKnown RBP9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gyg1Q9R062 333 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Olfr1432A0A140LHS7 346 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm5795E9PZN8 263 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm3187M0QWW3 260 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rpp30O88796 268 aaKnown RBP9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Dsc1P55849 886 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Armcx5Q3UZB0 606 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Slc9a2Q3ZAS0 814 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cep295nlQ497N6 533 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Mapk6Q61532 720 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Srgap3Q812A2 1099 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Fgd4Q91ZT5 766 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ascc1Q9D8Z1 356 aaKnown RBP9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Fut2Q9JL27 347 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tbc1d25A1A5B6 742 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Skint4A7TZF3 474 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Slfn9B1ARD6 910 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pdia2D3Z6P0 527 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Atpif1O35143 106 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 GpiP06745 558 aaKnown RBP9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 GhrP16882 650 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rab4aP56371 218 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Brf2Q3UAW9 420 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Srsf2Q62093 221 aaKnown RBP9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ndrg1Q62433 394 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ggnbp1Q6K1E7 370 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 AY358078Q6UY53 465 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Dsg4Q7TMD7 1041 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Prune1Q8BIW1 454 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rasal3Q8C2K5 1041 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rtp1Q8C8C1 263 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 CoprsQ9CQ13 173 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Dbndd2Q9CRD4 158 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Q9D1Z2 194 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Q9D9H8 365 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 F8a1Q00558 380 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Aifm3Q3TY86 605 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Fam92bQ3V2J0 292 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Nlrc3Q5DU56 1064 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tbc1d9bQ5SVR0 1263 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cyp2c54Q6XVG2 490 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pxylp1Q8BHA9 480 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 MfrpQ8K480 584 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Hmg20aQ9DC33 346 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Hipk3Q9ERH7 1192 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Prg3Q9JL95 222 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Git2Q9JLQ2 708 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Sept5Q9Z2Q6 369 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ttll11A4Q9F4 727 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Armc4B2RY50 1037 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Kcnt2D3Z649 1135 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Msl3l2G3X992 371 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 LdhcP00342 332 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Man2a1P27046 1150 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 TtkP35761 856 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Hrh3P58406 445 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 E330014E10RikQ3UL33 481 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Mtmr11Q3V1L6 700 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 D5Ertd577eQ499F0 481 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Slc30a1Q60738 503 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Adam39Q7M762 756 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pgm2Q7TSV4 620 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Hs6st2Q80UW0 612 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 GskipQ8BGR8 139 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Dnali1Q8BVN8 258 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tcf25Q8R3L2 676 aaKnown RBP9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 MyocdQ8VIM5 935 aa9.13□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms