RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Atf2P16951 487 aaKnown RBP23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Nudt1P53368 156 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Irs2P81122 1321 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Rcsd1Q3UZA1 412 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Pla2g4dQ50L43 825 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Taok1Q5F2E8 1001 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Arhgap30Q640N3 1101 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Vmn2r26Q6TAC4 855 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Eif2aQ8BJW6 581 aaKnown RBP23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Cox18Q8VC74 331 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Gimap4Q99JY3 219 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Trem2Q99NH8 227 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Rec114Q9CWH4 259 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Oser1Q9D722 291 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 PrelpQ9JK53 378 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Gm12695A2AGB2 545 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Gm5795E9PZN8 263 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Cd247P24161 164 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 St3gal1P54751 337 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Adcyap1r1P70205 496 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Slc8a1P70414 970 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Vps45P97390 570 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Znf746Q3U133 652 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Brms1lQ3U1T3 323 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Psg28Q4KL66 472 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Lrrc47Q505F5 581 aaKnown RBP23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Kpna1Q60960 538 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 TCAIMQ66JZ4 499 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Rxfp1Q6R6I7 758 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Fbxw7Q8VBV4 629 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Smg9Q9DB90 520 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Map3k6Q9WTR2 1291 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Adam17Q9Z0F8 827 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Rhox3fA2ANE1 215 aa23.49■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Gm5936A2BG95 728 aa23.49■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Gm5640A3KG49 728 aa23.49■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Znf518bB2RRE4 1077 aa23.49■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Rap1gds1E9Q912 607 aa23.49■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Msx3P70354 204 aa23.49■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Gm29609Q3UU56 907 aa23.49■■□□□ 1.35
Upf3a-201ENSMUST00000043767 StilQ60988 1262 aa23.49■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Rtl3Q6P1Y1 553 aa23.49■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Trnau1apQ80VC6 287 aaKnown RBP23.49■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Slc38a9Q8BGD6 560 aa23.49■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Gtf3c2Q8BL74 907 aa23.49■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Taf12Q8VE65 161 aa23.49■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Orc3Q9JK30 715 aaKnown RBP23.49■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Vsig10l2A0A140LHF2 776 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 9230113P08RikD3YWX3 137 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Akain1G3UWD5 69 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Gm5814J3QP80 125 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Rab21P35282 222 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 SykP48025 629 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 CidecP56198 239 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Cntn3Q07409 1028 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Itga1Q3V3R4 1179 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Q8VDP2 222 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Slc25a3Q8VEM8 357 aaKnown RBP23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Mrfap1Q9CQL7 125 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Syde1Q9DBZ9 737 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Gpr161B2RPY5 545 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Axin1O35625 863 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 AxlQ00993 888 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Slc7a4Q8BLQ7 635 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Ces2aQ8QZR3 558 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Gspt1Q8R050 636 aaKnown RBP23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Lrp8Q924X6 996 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Tpd52l2Q9CYZ2 220 aaKnown RBP23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Cpxm2Q9D2L5 764 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Nmnat1Q9EPA7 285 aa23.48■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Adamts6D3Z1A5 1117 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Pcdh9F8VPK8 1237 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Cyp4f40G3UW81 524 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Vmn2r39L7N2E5 861 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Dpysl2O08553 572 aaKnown RBP23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Rpl22P67984 128 aaKnown RBP23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Casp4P70343 373 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Uba1Q02053 1058 aaKnown RBP23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Shroom1Q5SX79 823 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Plk4Q64702 925 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Znf821Q6PD05 413 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Olfr1128Q7TR47 311 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 AgpsQ8C0I1 645 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 4921504E06RikQ8CET2 560 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Mkl1Q8K4J6 964 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Lpin1Q91ZP3 924 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 FdpsQ920E5 353 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Hars2Q99KK9 505 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Ccdc182Q9D9C6 152 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Rpl9-ps6A0A140T8T4 192 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Tmem215A7E1Z1 235 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Zscan5bB2RTN3 468 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Vmn2r115E9Q0E7 857 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Xbp1O35426 267 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Prf1P10820 554 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Gas2P11862 314 aaKnown RBP23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Rab20P35295 233 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Rpl9P51410 192 aaKnown RBP23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Atp13a5Q3TYU2 1216 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Nfe2l2Q60795 597 aa23.47■■□□□ 1.35
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms