RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 CCDC26Q8TAB7 109 aa20.43■□□□□ 0.86
PHGDH-210ENST00000641115 ZSCAN18Q8TBC5 510 aaPredicted RBP20.43■□□□□ 0.86
PHGDH-210ENST00000641115 USP13Q92995 863 aaPredicted RBP20.43■□□□□ 0.86
PHGDH-210ENST00000641115 PABPC5Q96DU9 382 aaKnown RBP20.43■□□□□ 0.86
PHGDH-210ENST00000641115 ZSWIM3Q96MP5 696 aa20.43■□□□□ 0.86
PHGDH-210ENST00000641115 ETNK2Q9NVF9 386 aa20.43■□□□□ 0.86
PHGDH-210ENST00000641115 DONSONQ9NYP3 566 aa20.43■□□□□ 0.86
PHGDH-210ENST00000641115 CCL26Q9Y258 94 aa20.43■□□□□ 0.86
PHGDH-210ENST00000641115 PRAMEF12O95522 483 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 COILP38432 576 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-210ENST00000641115 GBE1Q04446 702 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 DLX2Q07687 328 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-210ENST00000641115 RFWD3Q6PCD5 774 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 DRICH1Q6PGQ1 229 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-210ENST00000641115 ARID3BQ8IVW6 561 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-210ENST00000641115 NPAS3Q8IXF0 933 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 CCDC114Q96M63 670 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 RIPOR3Q96MK2 946 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 KIF9Q9HAQ2 790 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 MPP6Q9NZW5 540 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 CDH22Q9UJ99 828 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 E2F8A0AVK6 867 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 MFSD11O43934 449 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 GREM1O60565 184 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 RHOQP17081 205 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 EIF3EP60228 445 aaKnown RBP20.42■□□□□ 0.86
PHGDH-210ENST00000641115 LMNB2Q03252 620 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 COL19A1Q14993 1142 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 TTC27Q6P3X3 843 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 MAATS1Q7Z4T9 603 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 RTL3Q8N8U3 475 aaKnown RBP20.42■□□□□ 0.86
PHGDH-210ENST00000641115 SLC35B2Q8TB61 432 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 GRK7Q8WTQ7 553 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 FGF13Q92913 245 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 NKD2Q969F2 451 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-210ENST00000641115 IGSF8Q969P0 613 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 S1PR5Q9H228 398 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 GDE1Q9NZC3 331 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 DTLQ9NZJ0 730 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 PCYOX1Q9UHG3 505 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 AMACRQ9UHK6 382 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 FEZ2Q9UHY8 353 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-210ENST00000641115 DNPEPQ9ULA0 475 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 MFHAS1Q9Y4C4 1052 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 RAD54BQ9Y620 910 aa20.42■□□□□ 0.86
PHGDH-210ENST00000641115 TYW5A2RUC4 315 aaKnown RBP20.41■□□□□ 0.86
PHGDH-210ENST00000641115 DRGXA6NNA5 263 aa20.41■□□□□ 0.86
PHGDH-210ENST00000641115 WASH4PA8MWX3 477 aa20.41■□□□□ 0.86
PHGDH-210ENST00000641115 SCAMP3O14828 347 aaKnown RBP20.41■□□□□ 0.86
PHGDH-210ENST00000641115 TCF3P15923 654 aa20.41■□□□□ 0.86
PHGDH-210ENST00000641115 WEE1P30291 646 aa20.41■□□□□ 0.86
PHGDH-210ENST00000641115 VCPP55072 806 aaKnown RBP20.41■□□□□ 0.86
PHGDH-210ENST00000641115 DR1Q01658 176 aa20.41■□□□□ 0.86
PHGDH-210ENST00000641115 DHX34Q14147 1143 aaKnown RBP20.41■□□□□ 0.86
PHGDH-210ENST00000641115 C5orf22Q49AR2 442 aa20.41■□□□□ 0.86
PHGDH-210ENST00000641115 GLE1Q53GS7 698 aaKnown RBP20.41■□□□□ 0.86
PHGDH-210ENST00000641115 DENND4AQ7Z401 1863 aa20.41■□□□□ 0.86
PHGDH-210ENST00000641115 ZC3H18Q86VM9 953 aaKnown RBP20.41■□□□□ 0.86
PHGDH-210ENST00000641115 LZTR1Q8N653 840 aa20.41■□□□□ 0.86
PHGDH-210ENST00000641115 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.41■□□□□ 0.86
PHGDH-210ENST00000641115 ZNF148Q9UQR1 794 aa20.41■□□□□ 0.86
PHGDH-210ENST00000641115 V9GYY5 206 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-210ENST00000641115 MAP3K6O95382 1288 aa20.4■□□□□ 0.86
PHGDH-210ENST00000641115 RBP3P10745 1247 aa20.4■□□□□ 0.86
PHGDH-210ENST00000641115 CHKAP35790 457 aa20.4■□□□□ 0.86
PHGDH-210ENST00000641115 LTBRP36941 435 aa20.4■□□□□ 0.86
PHGDH-210ENST00000641115 MTHFRP42898 656 aa20.4■□□□□ 0.86
PHGDH-210ENST00000641115 KCNJ1P48048 391 aa20.4■□□□□ 0.86
PHGDH-210ENST00000641115 USP4Q13107 963 aa20.4■□□□□ 0.86
PHGDH-210ENST00000641115 ARTNQ5T4W7 220 aa20.4■□□□□ 0.86
PHGDH-210ENST00000641115 TTC39BQ5VTQ0 682 aaPredicted RBP20.4■□□□□ 0.86
PHGDH-210ENST00000641115 NLRP14Q86W24 1093 aa20.4■□□□□ 0.86
PHGDH-210ENST00000641115 BBS7Q8IWZ6 715 aa20.4■□□□□ 0.86
PHGDH-210ENST00000641115 FAM217AQ8IXS0 508 aa20.4■□□□□ 0.86
PHGDH-210ENST00000641115 CELF5Q8N6W0 485 aaKnown RBP20.4■□□□□ 0.86
PHGDH-210ENST00000641115 NPWQ8N729 165 aa20.4■□□□□ 0.86
PHGDH-210ENST00000641115 ATL2Q8NHH9 583 aa20.4■□□□□ 0.86
PHGDH-210ENST00000641115 PRICKLE1Q96MT3 831 aaPredicted RBP20.4■□□□□ 0.86
PHGDH-210ENST00000641115 LRRC1Q9BTT6 524 aa20.4■□□□□ 0.86
PHGDH-210ENST00000641115 RETREG1Q9H6L5 497 aa20.4■□□□□ 0.86
PHGDH-210ENST00000641115 TMEM248Q9NWD8 314 aa20.4■□□□□ 0.86
PHGDH-210ENST00000641115 H7C0C1 242 aa20.39■□□□□ 0.86
PHGDH-210ENST00000641115 ECEL1O95672 775 aa20.39■□□□□ 0.86
PHGDH-210ENST00000641115 GAS8O95995 478 aa20.39■□□□□ 0.86
PHGDH-210ENST00000641115 ITGAVP06756 1048 aa20.39■□□□□ 0.86
PHGDH-210ENST00000641115 ATP5OP48047 213 aa20.39■□□□□ 0.86
PHGDH-210ENST00000641115 IRAK1P51617 712 aa20.39■□□□□ 0.86
PHGDH-210ENST00000641115 SLC10A2Q12908 348 aaPredicted RBP20.39■□□□□ 0.86
PHGDH-210ENST00000641115 XRCC4Q13426 336 aa20.39■□□□□ 0.86
PHGDH-210ENST00000641115 OASLQ15646 514 aaKnown RBP20.39■□□□□ 0.86
PHGDH-210ENST00000641115 ZNF77Q15935 545 aa20.39■□□□□ 0.86
PHGDH-210ENST00000641115 ALFQ53S48 1182 aa20.39■□□□□ 0.86
PHGDH-210ENST00000641115 TFAP2DQ7Z6R9 452 aa20.39■□□□□ 0.86
PHGDH-210ENST00000641115 CFAP52Q8N1V2 620 aa20.39■□□□□ 0.86
PHGDH-210ENST00000641115 MSLNLQ96KJ4 702 aa20.39■□□□□ 0.86
PHGDH-210ENST00000641115 DRG1Q9Y295 367 aaKnown RBP20.39■□□□□ 0.86
PHGDH-210ENST00000641115 ZFP37Q9Y6Q3 630 aaPredicted RBP20.39■□□□□ 0.86
PHGDH-210ENST00000641115 TRDMT1O14717 391 aaKnown RBP20.38■□□□□ 0.85
PHGDH-210ENST00000641115 PPP1R12AO14974 1030 aaPredicted RBP20.38■□□□□ 0.85
PHGDH-210ENST00000641115 NCAM2O15394 837 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms