RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 ZNF567Q8N184 647 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 FBF1Q8TES7 1133 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 TBC1D31Q96DN5 1066 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 SLC39A13Q96H72 371 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 VAT1Q99536 393 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.76■□□□□ 0.43
PHGDH-208ENST00000641023 KLHL8Q9P2G9 620 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-208ENST00000641023 IGSF9Q9P2J2 1179 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 MYO16Q9Y6X6 1858 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 KCNK1O00180 336 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 EFCAB14O75071 495 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 GCAP28676 217 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 HOXC13P31276 330 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 OR1D2P34982 312 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 MLLT6P55198 1093 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-208ENST00000641023 COG7P83436 770 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 NRG1Q02297 640 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-208ENST00000641023 ZNF33AQ06730 810 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 EFEMP1Q12805 493 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 LRRC26Q2I0M4 334 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 IGDCC3Q8IVU1 814 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 CYP4X1Q8N118 509 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 MDM1Q8TC05 714 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 BCAS4Q8TDM0 211 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 CENPTQ96BT3 561 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 ZNF689Q96CS4 500 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-208ENST00000641023 TMEM169Q96HH4 297 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 CYTH2Q99418 400 aa17.76■□□□□ 0.43
PHGDH-208ENST00000641023 EIF2B3Q9NR50 452 aaKnown RBP17.76■□□□□ 0.43
PHGDH-208ENST00000641023 PSMC3IPQ9P2W1 217 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-208ENST00000641023 APOEP02649 317 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 CHN1P15882 459 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 MAGEA3P43357 314 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 PPARDQ03181 441 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 TMED2Q15363 201 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 PKN2Q16513 984 aaKnown RBP17.75■□□□□ 0.43
PHGDH-208ENST00000641023 ZSCAN26Q16670 478 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 MANEALQ5VSG8 457 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 MAML1Q92585 1016 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 ZNF558Q96NG5 402 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 CEP41Q9BYV8 373 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 EPN3Q9H201 632 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 PRDM5Q9NQX1 630 aaPredicted RBP17.75■□□□□ 0.43
PHGDH-208ENST00000641023 ZC3H7BQ9UGR2 993 aaKnown RBP17.75■□□□□ 0.43
PHGDH-208ENST00000641023 HS3ST4Q9Y661 456 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 ZNF638Q14966 1978 aaKnown RBP17.75■□□□□ 0.43
PHGDH-208ENST00000641023 CARNS1A5YM72 827 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 RASA4BC9J798 803 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 RASA4O43374 803 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 SOD2P04179 222 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 MLNP12872 115 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 CSF2RAP15509 400 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 PTPN3P26045 913 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 TUBP50607 506 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 C10orf120Q5SQS8 335 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 RASIP1Q5U651 963 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 PDCD7Q8N8D1 485 aaKnown RBP17.75■□□□□ 0.43
PHGDH-208ENST00000641023 GIPC2Q8TF65 315 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 XPO6Q96QU8 1125 aaKnown RBP17.75■□□□□ 0.43
PHGDH-208ENST00000641023 PPANQ9NQ55 473 aaKnown RBP17.75■□□□□ 0.43
PHGDH-208ENST00000641023 INTS9Q9NV88 658 aaKnown RBP17.75■□□□□ 0.43
PHGDH-208ENST00000641023 TRHDEQ9UKU6 1024 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 NEU3Q9UQ49 428 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 PLXNA3P51805 1871 aa17.75■□□□□ 0.43
PHGDH-208ENST00000641023 E9PAM4 449 aa17.74■□□□□ 0.43
PHGDH-208ENST00000641023 C2CD2LO14523 706 aa17.74■□□□□ 0.43
PHGDH-208ENST00000641023 BRAFP15056 766 aa17.74■□□□□ 0.43
PHGDH-208ENST00000641023 RAG1P15918 1043 aa17.74■□□□□ 0.43
PHGDH-208ENST00000641023 PSMB4P28070 264 aa17.74■□□□□ 0.43
PHGDH-208ENST00000641023 BTG3Q14201 252 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-208ENST00000641023 FAM117BQ6P1L5 589 aa17.74■□□□□ 0.43
PHGDH-208ENST00000641023 ZNF534Q76KX8 674 aa17.74■□□□□ 0.43
PHGDH-208ENST00000641023 SRRM1Q8IYB3 904 aaKnown RBP17.74■□□□□ 0.43
PHGDH-208ENST00000641023 ATP6V0D2Q8N8Y2 350 aa17.74■□□□□ 0.43
PHGDH-208ENST00000641023 CELF6Q96J87 481 aaKnown RBP17.74■□□□□ 0.43
PHGDH-208ENST00000641023 VN1R3Q9BXE9 311 aa17.74■□□□□ 0.43
PHGDH-208ENST00000641023 MARCH2Q9P0N8 246 aa17.74■□□□□ 0.43
PHGDH-208ENST00000641023 SENP1Q9P0U3 644 aa17.74■□□□□ 0.43
PHGDH-208ENST00000641023 AFF4Q9UHB7 1163 aaKnown RBP17.74■□□□□ 0.43
PHGDH-208ENST00000641023 TCRBV9S1A1TA0A576 114 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 SLC38A8A6NNN8 435 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 ADAM12O43184 909 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 CPP00450 1065 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 GSTA2P09210 222 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 RPL17P18621 184 aaKnown RBP17.73■□□□□ 0.43
PHGDH-208ENST00000641023 ATF6P18850 670 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 KRT15P19012 456 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 STX2P32856 288 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 MSH2P43246 934 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 TRIP4Q15650 581 aaPredicted RBP17.73■□□□□ 0.43
PHGDH-208ENST00000641023 TEX44Q53QW1 395 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 ACBD5Q5T8D3 534 aaPredicted RBP17.73■□□□□ 0.43
PHGDH-208ENST00000641023 ITPRIPL1Q6GPH6 555 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 LRRC8BQ6P9F7 803 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 NECAB2Q7Z6G3 386 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 TMEM199Q8N511 208 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 ZNF461Q8TAF7 563 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 MRRFQ96E11 262 aaKnown RBP17.73■□□□□ 0.43
PHGDH-208ENST00000641023 PAFAH2Q99487 392 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 UBE2OQ9C0C9 1292 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms